RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 CLEC4MQ9H2X3 399 aaPredicted RBP12.93□□□□□ -0.34
VPS13A-204ENST00000376634 NMRK2Q9NPI5 230 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 BAZ2AQ9UIF9 1905 aaKnown RBP12.93□□□□□ -0.34
VPS13A-204ENST00000376634 BCORL1Q5H9F3 1711 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 SERPINB8P50452 374 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 MOSPD2Q8NHP6 518 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 OXER1Q8TDS5 423 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 OSBPL6Q9BZF3 934 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 CHD2O14647 1828 aaKnown RBP12.93□□□□□ -0.34
VPS13A-204ENST00000376634 NPHP4O75161 1426 aaPredicted RBP12.93□□□□□ -0.34
VPS13A-204ENST00000376634 NOS3P29474 1203 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 TOB2Q14106 344 aaPredicted RBP12.93□□□□□ -0.34
VPS13A-204ENST00000376634 TRIM63Q969Q1 353 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 ILKAPQ9H0C8 392 aaPredicted RBP12.93□□□□□ -0.34
VPS13A-204ENST00000376634 PCDHGA4Q9Y5G9 962 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 TMEM120BA0PK00 339 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 SPP2Q13103 211 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 MIER2Q8N344 545 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 CCDC126Q96EE4 140 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 SEC16BQ96JE7 1060 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 ADGRG1Q9Y653 693 aa12.93□□□□□ -0.34
VPS13A-204ENST00000376634 SAC3D1A6NKF1 404 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 CYB5R4Q7L1T6 521 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 COMMD2Q86X83 199 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 SLC44A5Q8NCS7 719 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 HDHD2Q9H0R4 259 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 DBR1Q9UK59 544 aaKnown RBP12.92□□□□□ -0.34
VPS13A-204ENST00000376634 GRID1Q9ULK0 1009 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 VPS26AO75436 327 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 BMP10O95393 424 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 YWHAQP27348 245 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 GTF2E2P29084 291 aaKnown RBP12.92□□□□□ -0.34
VPS13A-204ENST00000376634 LSP1P33241 339 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 GEMIN4P57678 1058 aaKnown RBP12.92□□□□□ -0.34
VPS13A-204ENST00000376634 GLB1LQ6UWU2 654 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 FAM9CQ8IZT9 166 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 CYP4Z2PQ8N1L4 340 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 TMEM143Q96AN5 459 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 DCP1AQ9NPI6 582 aaPredicted RBP12.92□□□□□ -0.34
VPS13A-204ENST00000376634 NAGPAQ9UK23 515 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 PEX1O43933 1283 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 FNTAP49354 379 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 TMEM94Q12767 1356 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 LRG1P02750 347 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 ACOT2P49753 483 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 ATP12AP54707 1039 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 RNASE11Q8TAA1 199 aaKnown RBP12.92□□□□□ -0.34
VPS13A-204ENST00000376634 WDR24Q96S15 920 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 PLEKHF1Q96S99 279 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 DNALI1O14645 258 aaPredicted RBP12.92□□□□□ -0.34
VPS13A-204ENST00000376634 ZNF23P17027 643 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 PPP2R1BP30154 601 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 PGS1Q32NB8 556 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 TRIQKQ629K1 86 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 HPDLQ96IR7 371 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 BCL2L14Q9BZR8 327 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 TDRD3Q9H7E2 651 aaKnown RBP12.92□□□□□ -0.34
VPS13A-204ENST00000376634 A2ML1A8K2U0 1454 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 ZNF185O15231 689 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 RARBP10826 455 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 SNAPC2Q13487 334 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 FMR1NBQ8N0W7 255 aaPredicted RBP12.92□□□□□ -0.34
VPS13A-204ENST00000376634 CLYBLQ8N0X4 340 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 LRRC71Q8N4P6 559 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 FAM71DQ8N9W8 422 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 PARK7Q99497 189 aaKnown RBP12.92□□□□□ -0.34
VPS13A-204ENST00000376634 RERGLQ9H628 205 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 DLGAP2Q9P1A6 1054 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 IGSF1Q8N6C5 1336 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 IL6P05231 212 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 PSMC3P17980 439 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 EMC2Q15006 297 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 DDI1Q8WTU0 396 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 TRIM51Q9BSJ1 452 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 UBE2OQ9C0C9 1292 aaKnown RBP12.92□□□□□ -0.34
VPS13A-204ENST00000376634 ANXA9O76027 345 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 PDE5AO76074 875 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 GPC1P35052 558 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 CPT1AP50416 773 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 PPIL6Q8IXY8 311 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 LPAR1Q92633 364 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 PADI4Q9UM07 663 aa12.92□□□□□ -0.34
VPS13A-204ENST00000376634 PPP1R37O75864 691 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 UPP2O95045 317 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 RCN1Q15293 331 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 INAQ16352 499 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 NFIL3Q16649 462 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 TDRD10Q5VZ19 366 aaKnown RBP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 NAPEPLDQ6IQ20 393 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 ZNF473Q8WTR7 871 aaKnown RBP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 IGF2BP3O00425 579 aaKnown RBP eCLIP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 ITGA4P13612 1032 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 ALDH7A1P49419 539 aaKnown RBP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 KYNUQ16719 465 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 CCDC157Q569K6 752 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 PHACTR1Q9C0D0 580 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 PSTPIP1O43586 416 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 CTSHP09668 335 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms