RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 LSM14BQ9BX40 385 aaKnown RBP21.13■□□□□ 0.97
DDR1-228ENST00000376575 DNAI2Q9GZS0 605 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 HCFC1R1Q9NWW0 138 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 DNAJC12Q9UKB3 198 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 DAAM1Q9Y4D1 1078 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 PCDHB4Q9Y5E5 795 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 DOCK8Q8NF50 2099 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 A0A0C4DFX4 3053 aa21.12■□□□□ 0.97
DDR1-228ENST00000376575 TRIM66O15016 1216 aa21.12■□□□□ 0.97
DDR1-228ENST00000376575 HMGA1P17096 107 aaKnown RBP21.12■□□□□ 0.97
DDR1-228ENST00000376575 PTPN2P17706 415 aa21.12■□□□□ 0.97
DDR1-228ENST00000376575 TRIM21P19474 475 aaKnown RBP21.12■□□□□ 0.97
DDR1-228ENST00000376575 FANCCQ00597 558 aa21.12■□□□□ 0.97
DDR1-228ENST00000376575 SYCP1Q15431 976 aa21.12■□□□□ 0.97
DDR1-228ENST00000376575 DDR2Q16832 855 aa21.12■□□□□ 0.97
DDR1-228ENST00000376575 PRSS36Q5K4E3 855 aa21.12■□□□□ 0.97
DDR1-228ENST00000376575 GRASPQ7Z6J2 395 aaPredicted RBP21.12■□□□□ 0.97
DDR1-228ENST00000376575 DNAJB7Q7Z6W7 309 aaPredicted RBP21.12■□□□□ 0.97
DDR1-228ENST00000376575 ZMIZ2Q8NF64 920 aa21.12■□□□□ 0.97
DDR1-228ENST00000376575 SMARCD1Q96GM5 515 aa21.12■□□□□ 0.97
DDR1-228ENST00000376575 ZNF512Q96ME7 567 aaPredicted RBP21.12■□□□□ 0.97
DDR1-228ENST00000376575 FAM49BQ9NUQ9 324 aa21.12■□□□□ 0.97
DDR1-228ENST00000376575 FHOD1Q9Y613 1164 aa21.12■□□□□ 0.97
DDR1-228ENST00000376575 CLUHO75153 1309 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 A0A1W2PQC6 194 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 EPHB6O15197 1021 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 MICAL2O94851 1124 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 RHOP08100 348 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 VDRP11473 427 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 ITIH5Q86UX2 942 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 ELMOD1Q8N336 334 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 LEMD2Q8NC56 503 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 RBBP8NLQ8NC74 664 aaPredicted RBP21.11■□□□□ 0.97
DDR1-228ENST00000376575 TFAP2BQ92481 460 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 MYRFLQ96LU7 910 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 SMOQ99835 787 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 ZSWIM1Q9BR11 485 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 PHF7Q9BWX1 381 aaPredicted RBP21.11■□□□□ 0.97
DDR1-228ENST00000376575 PIDD1Q9HB75 910 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 PRKAG3Q9UGI9 489 aa21.11■□□□□ 0.97
DDR1-228ENST00000376575 ATP8B3O60423 1300 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 F8VP50 259 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 FOXN3O00409 490 aaPredicted RBP21.1■□□□□ 0.97
DDR1-228ENST00000376575 BEST1O76090 585 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 GRIK1P39086 918 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 NTHL1P78549 312 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 FILIP1LQ4L180 1135 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 PABPC1LQ4VXU2 614 aaKnown RBP21.1■□□□□ 0.97
DDR1-228ENST00000376575 PKDCCQ504Y2 493 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 SDHAF4Q5VUM1 108 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 FAM71AQ8IYT1 594 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 TRMT2BQ96GJ1 504 aaKnown RBP21.1■□□□□ 0.97
DDR1-228ENST00000376575 KCNK16Q96T55 309 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 DUSP16Q9BY84 665 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 STK33Q9BYT3 514 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 KRT82Q9NSB4 513 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 IL37Q9NZH6 218 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 USTQ9Y2C2 406 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 PATJQ8NI35 1801 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 MYH10P35580 1976 aa21.1■□□□□ 0.97
DDR1-228ENST00000376575 TCF20Q9UGU0 1960 aaKnown RBP21.1■□□□□ 0.97
DDR1-228ENST00000376575 ZNF638Q14966 1978 aaKnown RBP21.09■□□□□ 0.97
DDR1-228ENST00000376575 HHLA1C9JL84 531 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 O00370 1275 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 NRG2O14511 850 aaPredicted RBP21.09■□□□□ 0.97
DDR1-228ENST00000376575 TNFRSF10BO14763 440 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 MOSPD3O75425 235 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 AP1G2O75843 785 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 SERPINC1P01008 464 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 CSH1P0DML2 217 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 CSH2P0DML3 217 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 PBX1P40424 430 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 CCR2P41597 374 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 JAM2P57087 298 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 DRAP1Q14919 205 aaPredicted RBP21.09■□□□□ 0.97
DDR1-228ENST00000376575 VEPH1Q14D04 833 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 CNGA2Q16280 664 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 ARHGAP44Q17R89 818 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 SLC5A9Q2M3M2 681 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 SGO2Q562F6 1265 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 TJAP1Q5JTD0 557 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 LCLAT1Q6UWP7 414 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 CLEC20AQ6ZU45 233 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 SCN4BQ8IWT1 228 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 HS6ST3Q8IZP7 471 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 ANKRD52Q8NB46 1076 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 GPR152Q8TDT2 470 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 GIPC2Q8TF65 315 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 CORO1BQ9BR76 489 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 MED10Q9BTT4 135 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 TTLL2Q9BWV7 592 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 IL21Q9HBE4 155 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 ZNF334Q9HCZ1 680 aaPredicted RBP21.09■□□□□ 0.97
DDR1-228ENST00000376575 PNPLA8Q9NP80 782 aa21.09■□□□□ 0.97
DDR1-228ENST00000376575 DMAP1Q9NPF5 467 aaPredicted RBP21.09■□□□□ 0.97
DDR1-228ENST00000376575 FAM207AQ9NSI2 230 aaPredicted RBP21.09■□□□□ 0.97
DDR1-228ENST00000376575 DENND4CQ5VZ89 1909 aa21.08■□□□□ 0.97
DDR1-228ENST00000376575 C19orf67A6NJJ6 358 aa21.08■□□□□ 0.97
DDR1-228ENST00000376575 SLC38A8A6NNN8 435 aa21.08■□□□□ 0.97
DDR1-228ENST00000376575 FAM200BP0CF97 657 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms