RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 ALOX15P16050 662 aaPredicted RBP15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 EXOSC10Q01780 885 aaKnown RBP15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 ZNF177Q13360 481 aaPredicted RBP15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 C16orf86Q6ZW13 317 aa15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 CCDC60Q8IWA6 550 aaPredicted RBP15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 TTC39CQ8N584 583 aa15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 ENO4A6NNW6 628 aa15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 FNTAP49354 379 aa15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 SGMS1Q86VZ5 419 aa15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 FEZF2Q8TBJ5 459 aa15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 SLITRK1Q96PX8 696 aa15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 PSD3Q9NYI0 1048 aa15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 CAB39Q9Y376 341 aaPredicted RBP15.27■□□□□ 0.04
NOTCH4-201ENST00000375023 A0A1W2PQC6 194 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 SUPT7LO94864 414 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 RBP3P10745 1247 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 FGFR1P11362 822 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 PDIA5Q14554 519 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 DCP1BQ8IZD4 617 aaKnown RBP15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 PGLYRP2Q96PD5 576 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 C7orf25Q9BPX7 421 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 H0YC42 278 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 POMCP01189 267 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 TGM2P21980 687 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 POU1F1P28069 291 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 MED21Q13503 144 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 RSPH9Q9H1X1 276 aaPredicted RBP15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 EPN3Q9H201 632 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 RANBP17Q9H2T7 1088 aaKnown RBP15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 APPL1Q9UKG1 709 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 ALG6Q9Y672 507 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 RNASEH1O60930 286 aaKnown RBP15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 ABCB1P08183 1280 aaPredicted RBP15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 TMEM132BQ14DG7 1078 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 POM121L1PQ3SYA9 428 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 SEC16BQ96JE7 1060 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 ECSITQ9BQ95 431 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 MANSC1Q9H8J5 431 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 TMEM8AQ9HCN3 771 aa15.27■□□□□ 0.03
NOTCH4-201ENST00000375023 PNPLA7Q6ZV29 1317 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 F8W810 466 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 RGS4P49798 205 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 PDK1Q15118 436 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 E4F1Q66K89 784 aaPredicted RBP15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 FBXO32Q969P5 355 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 ZIM3Q96PE6 472 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 CCT8L2Q96SF2 557 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 BBS2Q9BXC9 721 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 NBNO60934 754 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 CKMP06732 381 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 FGFR2P21802 821 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 HOXA7P31268 230 aaPredicted RBP15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 BARGINQ6ZT62 677 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 NT5DC3Q86UY8 548 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 RNF103O00237 685 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 APOA1P02647 267 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 URODP06132 367 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 SPRP35270 261 aaPredicted RBP15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 SLC29A2Q14542 456 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 MAPRE1Q15691 268 aaKnown RBP15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 ANKS6Q68DC2 871 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 PRR23BQ6ZRT6 265 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 EPS8L3Q8TE67 593 aaKnown RBP15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 DDI1Q8WTU0 396 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 TRMT6Q9UJA5 497 aaKnown RBP15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 KLRC1P26715 233 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 GSSP48637 474 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 MAP3K10Q02779 954 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 SLC38A7Q9NVC3 462 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 SNX8Q9Y5X2 465 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 NFIBO00712 420 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 SCAMP3O14828 347 aaKnown RBP15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 OPLAHO14841 1288 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 STX7O15400 261 aaKnown RBP15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 IL18RAPO95256 599 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 KCNA3P22001 575 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 B3GALNT2Q8NCR0 500 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 MED8Q96G25 268 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 PAWRQ96IZ0 340 aaKnown RBP15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 DMAP1Q9NPF5 467 aaPredicted RBP15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 GIMAP4Q9NUV9 329 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 TBX20Q9UMR3 447 aa15.26■□□□□ 0.03
NOTCH4-201ENST00000375023 C19orf81C9J6K1 198 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 CYB561D2O14569 222 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 GSNP06396 782 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 ODC1P11926 461 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 GPC1P35052 558 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 PRIM2P49643 509 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 CCL23P55773 120 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 ITPK1Q13572 414 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 ARHGAP17Q68EM7 881 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 TEX9Q8N6V9 391 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 DUSP10Q9Y6W6 482 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 WDR19Q8NEZ3 1342 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 TAF6P49848 677 aa15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 BTG3Q14201 252 aaPredicted RBP15.25■□□□□ 0.03
NOTCH4-201ENST00000375023 NAB2Q15742 525 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms