RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 LRRC74BQ6ZQY2 392 aa11.64□□□□□ -0.55
CCDC40-203ENST00000374877 NIPA1Q7RTP0 329 aa11.64□□□□□ -0.55
CCDC40-203ENST00000374877 RIOX2Q8IUF8 465 aa11.64□□□□□ -0.55
CCDC40-203ENST00000374877 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
CCDC40-203ENST00000374877 PTPRN2Q92932 1015 aa11.64□□□□□ -0.55
CCDC40-203ENST00000374877 RBM41Q96IZ5 413 aaKnown RBP11.64□□□□□ -0.55
CCDC40-203ENST00000374877 SLITRK1Q96PX8 696 aa11.64□□□□□ -0.55
CCDC40-203ENST00000374877 ACAD9Q9H845 621 aa11.64□□□□□ -0.55
CCDC40-203ENST00000374877 C10orf88Q9H8K7 445 aa11.64□□□□□ -0.55
CCDC40-203ENST00000374877 PCDHB4Q9Y5E5 795 aa11.64□□□□□ -0.55
CCDC40-203ENST00000374877 DHX15O43143 795 aaKnown RBP11.63□□□□□ -0.55
CCDC40-203ENST00000374877 TBX10O75333 385 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 GLRA2P23416 452 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 GNA15P30679 374 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 CPA2P48052 419 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 GTF2A2P52657 109 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 SPDYAQ5MJ70 313 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 CWF19L1Q69YN2 538 aaKnown RBP11.63□□□□□ -0.55
CCDC40-203ENST00000374877 SLC39A4Q6P5W5 647 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 C3orf62Q6ZUJ4 267 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 ZNF677Q86XU0 584 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 RHPN2Q8IUC4 686 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 RCOR2Q8IZ40 523 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 ZNF398Q8TD17 642 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 WDR60Q8WVS4 1066 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 FAM136AQ96C01 138 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 MFSD14AQ96MC6 490 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 FBXO40Q9UH90 709 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 IVNS1ABPQ9Y6Y0 642 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 PSMG1O95456 288 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 PHBP35232 272 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 NOMO3P69849 1222 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 ROR2Q01974 943 aaKnown RBP11.63□□□□□ -0.55
CCDC40-203ENST00000374877 SLC34A1Q06495 639 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 EFHC2Q5JST6 749 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 RINLQ6ZS11 566 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 GPD1LQ8N335 351 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 CEP120Q8N960 986 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 FEZF2Q8TBJ5 459 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 TTC17Q96AE7 1141 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 FNBP1Q96RU3 617 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 TMEM120AQ9BXJ8 343 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 ASCC2Q9H1I8 757 aaPredicted RBP11.63□□□□□ -0.55
CCDC40-203ENST00000374877 COL20A1Q9P218 1284 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 SHOC2Q9UQ13 582 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 SCINQ9Y6U3 715 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 HLA-DRAP01903 254 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 GTF2H1P32780 548 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 MTMR1Q13613 665 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 TTC7BQ86TV6 843 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 ATP11CQ8NB49 1132 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 SENP7Q9BQF6 1050 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 ARMCX1Q9P291 453 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 SAE1Q9UBE0 346 aaPredicted RBP11.63□□□□□ -0.55
CCDC40-203ENST00000374877 RABGEF1Q9UJ41 708 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 RIPK3Q9Y572 518 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 CLUHO75153 1309 aa11.63□□□□□ -0.55
CCDC40-203ENST00000374877 RAB27AP51159 221 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 VCPP55072 806 aaKnown RBP11.62□□□□□ -0.55
CCDC40-203ENST00000374877 RPS6P62753 249 aaKnown RBP11.62□□□□□ -0.55
CCDC40-203ENST00000374877 THOC5Q13769 683 aaKnown RBP11.62□□□□□ -0.55
CCDC40-203ENST00000374877 WDR72Q3MJ13 1102 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 BBS9Q3SYG4 887 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 TXNRD3NBQ6F5E7 133 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 SPOCD1Q6ZMY3 1216 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 MFN1Q8IWA4 741 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 PALM2Q8IXS6 379 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 BSNDQ8WZ55 320 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 ZNF516Q92618 1163 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 PTCD3Q96EY7 689 aaKnown RBP11.62□□□□□ -0.55
CCDC40-203ENST00000374877 SYNCQ9H7C4 482 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 AGO4Q9HCK5 861 aaKnown RBP11.62□□□□□ -0.55
CCDC40-203ENST00000374877 HOMER2Q9NSB8 354 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 ETAA1Q9NY74 926 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 IP6K2Q9UHH9 426 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 ASB3Q9Y575 518 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 SIGLEC16A6NMB1 481 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 F8VP50 259 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 MSS51Q4VC12 460 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 ANKRD22Q5VYY1 191 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 PLEKHA7Q6IQ23 1121 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 ABRAQ8N0Z2 381 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 PHC3Q8NDX5 983 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 TUBB6Q9BUF5 446 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 TRIM4Q9C037 500 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 PPCSQ9HAB8 311 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 PARVAQ9NVD7 372 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 TAS2R1Q9NYW7 299 aa11.62□□□□□ -0.55
CCDC40-203ENST00000374877 MAP3K7O43318 606 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 LPXNO60711 386 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 CACNA2D1P54289 1103 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 OCRLQ01968 901 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 FNBP1LQ5T0N5 605 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 OR52E8Q6IFG1 317 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 DCUN1D2Q6PH85 259 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 ANKRD23Q86SG2 305 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 APLFQ8IW19 511 aaPredicted RBP11.61□□□□□ -0.55
CCDC40-203ENST00000374877 GALNT15Q8N3T1 639 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 FBXO36Q8NEA4 188 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms