RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TSR3Q9UJK0 312 aaKnown RBP14.76□□□□□ -0.05
LMX1B-202ENST00000373474 CASP4P49662 377 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 INTS5Q6P9B9 1019 aaKnown RBP14.76□□□□□ -0.05
LMX1B-202ENST00000373474 TAAR1Q96RJ0 339 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 ZSCAN32Q9NX65 697 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 SALL1Q9NSC2 1324 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 FDFT1P37268 417 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 SV2CQ496J9 727 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 GALNT4Q8N4A0 578 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 SPON2Q9BUD6 331 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 SOX13Q9UN79 622 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 MAP3K13O43283 966 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 GH1P01241 217 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 ICAM1P05362 532 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 GZMAP12544 262 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 STIP1P31948 543 aaKnown RBP14.76□□□□□ -0.05
LMX1B-202ENST00000373474 LRRN4CLQ8ND94 238 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 EXOSC4Q9NPD3 245 aaKnown RBP14.76□□□□□ -0.05
LMX1B-202ENST00000373474 TJP2Q9UDY2 1190 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 PRG3Q9Y2Y8 225 aaPredicted RBP14.76□□□□□ -0.05
LMX1B-202ENST00000373474 DTNAQ9Y4J8 743 aa14.76□□□□□ -0.05
LMX1B-202ENST00000373474 DYTNA2CJ06 578 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 GLI1P08151 1106 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 EFHC1Q5JVL4 640 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 ACSF2Q96CM8 615 aaPredicted RBP14.75□□□□□ -0.05
LMX1B-202ENST00000373474 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.75□□□□□ -0.05
LMX1B-202ENST00000373474 PRMT7Q9NVM4 692 aaPredicted RBP14.75□□□□□ -0.05
LMX1B-202ENST00000373474 TRIM49D1C9J1S8 452 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 ALBP02768 609 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 PDGFRBP09619 1106 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 LAMC2Q13753 1193 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 VPS72Q15906 364 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 ARMCX4Q5H9R4 360 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 ADGRA1Q86SQ6 560 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 P3H2Q8IVL5 708 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 TFB1MQ8WVM0 346 aaKnown RBP14.75□□□□□ -0.05
LMX1B-202ENST00000373474 ATG4AQ8WYN0 398 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 MAP3K20Q9NYL2 800 aaKnown RBP14.75□□□□□ -0.05
LMX1B-202ENST00000373474 MROH9Q5TGP6 573 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 C11orf63Q6NUN7 778 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 MICALL2Q8IY33 904 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 CALML6Q8TD86 181 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 TADA1Q96BN2 335 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 ASIC4Q96FT7 647 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 CATSPER2Q96P56 530 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 H2AFYO75367 372 aaKnown RBP14.75□□□□□ -0.05
LMX1B-202ENST00000373474 DDX50Q9BQ39 737 aaKnown RBP14.75□□□□□ -0.05
LMX1B-202ENST00000373474 LBHD1Q9BQE6 289 aaPredicted RBP14.75□□□□□ -0.05
LMX1B-202ENST00000373474 AFF4Q9UHB7 1163 aaKnown RBP14.75□□□□□ -0.05
LMX1B-202ENST00000373474 ADGRA3Q8IWK6 1321 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 EIF2S1P05198 315 aaKnown RBP14.75□□□□□ -0.05
LMX1B-202ENST00000373474 IMPDH2P12268 514 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 HMOX2P30519 316 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 KIAA0895Q8NCT3 520 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 CHST13Q8NET6 341 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 ZNF507Q8TCN5 953 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 FAM111AQ96PZ2 611 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 CDC42EP4Q9H3Q1 356 aaKnown RBP14.75□□□□□ -0.05
LMX1B-202ENST00000373474 FAM49BQ9NUQ9 324 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 AIPL1Q9NZN9 384 aa14.75□□□□□ -0.05
LMX1B-202ENST00000373474 USP1O94782 785 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 RHOBTB1O94844 696 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 PLOD1Q02809 727 aaPredicted RBP14.74□□□□□ -0.05
LMX1B-202ENST00000373474 BTKQ06187 659 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 TFDP3Q5H9I0 405 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 AARS2Q5JTZ9 985 aaKnown RBP14.74□□□□□ -0.05
LMX1B-202ENST00000373474 EFCAB12Q6NXP0 572 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 FANCEQ9HB96 536 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 E2F8A0AVK6 867 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 CPB1P15086 417 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 PSMA3P25788 255 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 COPAP53621 1224 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 NDUFA5Q16718 116 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 FBXO36Q8NEA4 188 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 GMCL1P1Q8NEA9 526 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 MTERF3Q96E29 417 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 MEGF6O75095 1541 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 ZNF197O14709 1029 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 NLRP9Q7RTR0 991 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 HPDLQ96IR7 371 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 OSGEPQ9NPF4 335 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 TMEM161AQ9NX61 479 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 SAC3D1A6NKF1 404 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 GHRP10912 638 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 NUP62P37198 522 aaPredicted RBP14.74□□□□□ -0.05
LMX1B-202ENST00000373474 PTENP60484 403 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 CNGA2Q16280 664 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 SLC7A14Q8TBB6 771 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 RTFDC1Q9BY42 306 aaPredicted RBP14.74□□□□□ -0.05
LMX1B-202ENST00000373474 NDEL1Q9GZM8 345 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 CATSPERBQ9H7T0 1116 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 CAAP1Q9H8G2 361 aa14.74□□□□□ -0.05
LMX1B-202ENST00000373474 H2AFY2Q9P0M6 372 aaPredicted RBP14.74□□□□□ -0.05
LMX1B-202ENST00000373474 CNOT7Q9UIV1 285 aaKnown RBP14.74□□□□□ -0.05
LMX1B-202ENST00000373474 MTSS1O43312 755 aa14.73□□□□□ -0.05
LMX1B-202ENST00000373474 GRK2P25098 689 aa14.73□□□□□ -0.05
LMX1B-202ENST00000373474 KCNMA1Q12791 1236 aa14.73□□□□□ -0.05
LMX1B-202ENST00000373474 CSTF3Q12996 717 aaKnown RBP14.73□□□□□ -0.05
LMX1B-202ENST00000373474 TRIP4Q15650 581 aaPredicted RBP14.73□□□□□ -0.05
LMX1B-202ENST00000373474 TARS2Q9BW92 718 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms