RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 GMCL1P1Q8NEA9 526 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 CCDC127Q96BQ5 260 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 ERP27Q96DN0 273 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 COX4I2Q96KJ9 171 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 TDRD3Q9H7E2 651 aaKnown RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 DDX18Q9NVP1 670 aaKnown RBP9.28□□□□□ -0.92
ATG4A-203ENST00000372232 SELENONQ9NZV5 590 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 CNTN3Q9P232 1028 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 ATRNL1Q5VV63 1379 aa9.28□□□□□ -0.92
ATG4A-203ENST00000372232 CYP3A7-CYP3A51PA0A087WV96 503 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 TRIM64CA6NLI5 447 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 DDX3XO00571 662 aaKnown RBP eCLIP9.27□□□□□ -0.92
ATG4A-203ENST00000372232 MEIS2O14770 477 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 OPHN1O60890 802 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 ENTPD3O75355 529 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 STAM2O75886 525 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 GDF11O95390 407 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 CYP3A7P24462 503 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 MTIF2P46199 727 aaKnown RBP9.27□□□□□ -0.92
ATG4A-203ENST00000372232 TGFBIQ15582 683 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 MYLK3Q32MK0 819 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 FIGNQ5HY92 759 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 HYIQ5T013 277 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 RFWD3Q6PCD5 774 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 RBM44Q6ZP01 1051 aaKnown RBP9.27□□□□□ -0.92
ATG4A-203ENST00000372232 SPERTQ8NA61 448 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 ZNF784Q8NCA9 323 aaPredicted RBP9.27□□□□□ -0.92
ATG4A-203ENST00000372232 RIN3Q8TB24 985 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 PIP4K2CQ8TBX8 421 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 USP6NLQ92738 828 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 GMCL1Q96IK5 515 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 PRMT6Q96LA8 375 aaPredicted RBP9.27□□□□□ -0.92
ATG4A-203ENST00000372232 NEURL2Q9BR09 285 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 NOC4LQ9BVI4 516 aaKnown RBP9.27□□□□□ -0.92
ATG4A-203ENST00000372232 PDGFDQ9GZP0 370 aaPredicted RBP9.27□□□□□ -0.92
ATG4A-203ENST00000372232 PLGRKTQ9HBL7 147 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 ZDHHC7Q9NXF8 308 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 ANGPTL2Q9UKU9 493 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 MTUS1Q9ULD2 1270 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 SLC30A1Q9Y6M5 507 aa9.27□□□□□ -0.92
ATG4A-203ENST00000372232 SCN9AQ15858 1988 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 SRCAPQ6ZRS2 3230 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 LOC105371267A0A1B0GV96 52 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 NKRFO15226 690 aaKnown RBP eCLIP9.27□□□□□ -0.93
ATG4A-203ENST00000372232 ZNF862O60290 1169 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 NDUFB10O96000 172 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 ENPP1P22413 925 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 HOXA7P31268 230 aaPredicted RBP9.27□□□□□ -0.93
ATG4A-203ENST00000372232 KIF11P52732 1056 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 JAG1P78504 1218 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 HSP90AA5PQ58FG0 334 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 WDR78Q5VTH9 848 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 DHRS4L2Q6PKH6 230 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 IZUMO2Q6UXV1 221 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 DSTYKQ6XUX3 929 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 VASH1Q7L8A9 365 aaPredicted RBP9.27□□□□□ -0.93
ATG4A-203ENST00000372232 MYO1HQ8N1T3 1032 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 FAM169BQ8N8A8 192 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 GIPC3Q8TF64 312 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 PYROXD1Q8WU10 500 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 CRYGNQ8WXF5 182 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 EFHD2Q96C19 240 aaPredicted RBP9.27□□□□□ -0.93
ATG4A-203ENST00000372232 DNAJC19Q96DA6 116 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 MBOAT7Q96N66 472 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 ERGIC2Q96RQ1 377 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 AMNQ9BXJ7 453 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 ANO3Q9BYT9 981 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 BCO2Q9BYV7 579 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 PABPC3Q9H361 631 aaKnown RBP9.27□□□□□ -0.93
ATG4A-203ENST00000372232 DMTF1Q9Y222 760 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 CHKBQ9Y259 395 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 SIPA1L1O43166 1804 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 SLX4Q8IY92 1834 aa9.27□□□□□ -0.93
ATG4A-203ENST00000372232 YDJCA8MPS7 323 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 NDC80O14777 642 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 TEX28O15482 410 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 DAPK3O43293 454 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 TBCAO75347 108 aaKnown RBP9.26□□□□□ -0.93
ATG4A-203ENST00000372232 GH2P01242 217 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 KLK7P49862 253 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 BCAP31P51572 246 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 LRRC63Q05C16 580 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 AP3B2Q13367 1082 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 SUZ12Q15022 739 aaKnown RBP9.26□□□□□ -0.93
ATG4A-203ENST00000372232 TRIM71Q2Q1W2 868 aaKnown RBP9.26□□□□□ -0.93
ATG4A-203ENST00000372232 ANKDD1AQ495B1 522 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 VARS2Q5ST30 1063 aaKnown RBP9.26□□□□□ -0.93
ATG4A-203ENST00000372232 MOXD1Q6UVY6 613 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 NEK10Q6ZWH5 1172 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 NLRP9Q7RTR0 991 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 GRAMD2AQ8IUY3 354 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 DDHD1Q8NEL9 900 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 P2RX7Q99572 595 aaKnown RBP9.26□□□□□ -0.93
ATG4A-203ENST00000372232 CEP44Q9C0F1 390 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 NT5C3AQ9H0P0 336 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 NLRC4Q9NPP4 1024 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 UBP1Q9NZI7 540 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 CNOT7Q9UIV1 285 aaKnown RBP9.26□□□□□ -0.93
ATG4A-203ENST00000372232 PPP1R9AQ9ULJ8 1098 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 FAF1Q9UNN5 650 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms