RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 VPS28Q9UK41 221 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 OXCT1P55809 520 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 ZNF200P98182 395 aaPredicted RBP15.34■□□□□ 0.05
NDC1-201ENST00000371429 EARS2Q5JPH6 523 aaKnown RBP15.34■□□□□ 0.05
NDC1-201ENST00000371429 GPR142Q7Z601 462 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 LINC00523Q86TU6 105 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 COPS5Q92905 334 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 ZNF669Q96BR6 464 aaPredicted RBP15.34■□□□□ 0.05
NDC1-201ENST00000371429 KDM4CQ9H3R0 1056 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 NSMCE4AQ9NXX6 385 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 GLTPD2A6NH11 291 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 CDH16O75309 829 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 HAUS5O94927 633 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 ACAT1P24752 427 aaKnown RBP15.34■□□□□ 0.05
NDC1-201ENST00000371429 STIP1P31948 543 aaKnown RBP15.34■□□□□ 0.05
NDC1-201ENST00000371429 MTFR1Q15390 333 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 CELF3Q5SZQ8 465 aaKnown RBP15.34■□□□□ 0.05
NDC1-201ENST00000371429 LRRC43Q8N309 656 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 ALG13Q9NP73 1137 aaKnown RBP15.34■□□□□ 0.05
NDC1-201ENST00000371429 CNTNAP2Q9UHC6 1331 aa15.34■□□□□ 0.05
NDC1-201ENST00000371429 ARHGAP10A1A4S6 786 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 EML1O00423 815 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 PPFIA2O75334 1257 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 CYP3A4P08684 503 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 SETSIPP0DME0 302 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 KCNT1Q5JUK3 1230 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.33■□□□□ 0.057e-9■■■■■ 72.6
NDC1-201ENST00000371429 ATP6V1G3Q96LB4 118 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 NRCAMQ92823 1304 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 LZTS3O60299 673 aaPredicted RBP15.33■□□□□ 0.05
NDC1-201ENST00000371429 PLEKP08567 350 aaPredicted RBP15.33■□□□□ 0.05
NDC1-201ENST00000371429 WEE1P30291 646 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 PTK6Q13882 451 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 BEND6Q5SZJ8 279 aaPredicted RBP15.33■□□□□ 0.05
NDC1-201ENST00000371429 KRT80Q6KB66 452 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 YIPF2Q9BWQ6 316 aa15.33■□□□□ 0.05
NDC1-201ENST00000371429 TLR8Q9NR97 1041 aaKnown RBP15.33■□□□□ 0.05
NDC1-201ENST00000371429 BARX2Q9UMQ3 279 aaPredicted RBP15.33■□□□□ 0.05
NDC1-201ENST00000371429 SPAG6O75602 509 aa15.33■□□□□ 0.04
NDC1-201ENST00000371429 CNPY3Q9BT09 278 aa15.33■□□□□ 0.04
NDC1-201ENST00000371429 EMILIN2Q9BXX0 1053 aa15.33■□□□□ 0.04
NDC1-201ENST00000371429 USP20Q9Y2K6 914 aa15.33■□□□□ 0.04
NDC1-201ENST00000371429 KIF1AQ12756 1690 aa15.33■□□□□ 0.04
NDC1-201ENST00000371429 ENDOD1O94919 500 aa15.33■□□□□ 0.04
NDC1-201ENST00000371429 GZMAP12544 262 aa15.33■□□□□ 0.04
NDC1-201ENST00000371429 ARMC6Q6NXE6 501 aa15.33■□□□□ 0.04
NDC1-201ENST00000371429 BLOC1S5Q8TDH9 187 aa15.33■□□□□ 0.04
NDC1-201ENST00000371429 RIN2Q8WYP3 895 aaPredicted RBP15.33■□□□□ 0.04
NDC1-201ENST00000371429 MAP3K6O95382 1288 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 LSM8O95777 96 aaKnown RBP15.32■□□□□ 0.04
NDC1-201ENST00000371429 GEMP55040 296 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 SPDYAQ5MJ70 313 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.32■□□□□ 0.04
NDC1-201ENST00000371429 COG1Q8WTW3 980 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 PGLYRP2Q96PD5 576 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 PNMA5Q96PV4 448 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 CARD9Q9H257 536 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 TASP1Q9H6P5 420 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 ACTR5Q9H9F9 607 aaPredicted RBP15.32■□□□□ 0.04
NDC1-201ENST00000371429 RBM12Q9NTZ6 932 aaKnown RBP15.32■□□□□ 0.04
NDC1-201ENST00000371429 NFASCO94856 1347 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 PSTPIP1O43586 416 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 RHOCP08134 193 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 KPNA1P52294 538 aaPredicted RBP15.32■□□□□ 0.04
NDC1-201ENST00000371429 PDK2Q15119 407 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 C3orf62Q6ZUJ4 267 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 CCDC60Q8IWA6 550 aaPredicted RBP15.32■□□□□ 0.04
NDC1-201ENST00000371429 TEKT4Q8WW24 435 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 APBA2Q99767 749 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 FBXO44Q9H4M3 255 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 PLA2G4CQ9UP65 541 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 RRM1P23921 792 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 EEF1B2P24534 225 aaKnown RBP15.32■□□□□ 0.04
NDC1-201ENST00000371429 NDST1P52848 882 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 TPCN2Q8NHX9 752 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 ZNF507Q8TCN5 953 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 KLRG1Q96E93 195 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 LRRC37BQ96QE4 947 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 ASPSCR1Q9BZE9 553 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 SMARCAL1Q9NZC9 954 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 CD274Q9NZQ7 290 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 C2orf81A6NN90 581 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 TAF11Q15544 211 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 TRADDQ15628 312 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 GRAMD1BQ3KR37 738 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 SLC13A5Q86YT5 568 aaPredicted RBP15.32■□□□□ 0.04
NDC1-201ENST00000371429 GAD1Q99259 594 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 SMYD3Q9H7B4 428 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 XAB2Q9HCS7 855 aaKnown RBP15.32■□□□□ 0.04
NDC1-201ENST00000371429 GPATCH2LQ9NWQ4 482 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 ADA2Q9NZK5 511 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 FRMPD4Q14CM0 1322 aa15.32■□□□□ 0.04
NDC1-201ENST00000371429 KDM1AO60341 852 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
NDC1-201ENST00000371429 GYS2P54840 703 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 HERC6Q8IVU3 1022 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 DACT3Q96B18 629 aaPredicted RBP15.31■□□□□ 0.04
NDC1-201ENST00000371429 WNK4Q96J92 1243 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 ZSWIM1Q9BR11 485 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 MRPL40Q9NQ50 206 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms