RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 SMC1AQ14683 1233 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 EARS2Q5JPH6 523 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 ZNF569Q5MCW4 686 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 ZNF618Q5T7W0 954 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 PAPD7Q5XG87 772 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 OVOS1Q6IE37 1185 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 CENPPQ6IPU0 288 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 KLHL10Q6JEL2 608 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 RAD9BQ6WBX8 426 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 EEPD1Q7L9B9 569 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 CABP7Q86V35 215 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 ZDHHC13Q8IUH4 622 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 TAB3Q8N5C8 712 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 RASSF8Q8NHQ8 419 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 P2RX5Q93086 422 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 YME1L1Q96TA2 773 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 DPH2Q9BQC3 489 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 MTG1Q9BT17 334 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 FUT8Q9BYC5 575 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 NT5C3AQ9H0P0 336 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 POMKQ9H5K3 350 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 RIOX1Q9H6W3 641 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 MYO6Q9UM54 1294 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 TMX2Q9Y320 296 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 BAZ2BQ9UIF8 2168 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 FLNCQ14315 2725 aa7.03□□□□□ -1.28
ECHDC1-202ENST00000368289 ATP8B3O60423 1300 aa7.02□□□□□ -1.28
ECHDC1-202ENST00000368289 KLRF2D3W0D1 207 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 TNFRSF10CO14798 259 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 RGS13O14921 159 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 CYP26A1O43174 497 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 KLRC4O43908 158 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 ZEB2O60315 1214 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 EFCAB14O75071 495 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 PRDM1O75626 825 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 SLITRK5O94991 958 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 LCA5LO95447 670 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 DCNP07585 359 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 SPINK2P20155 84 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 ANXA13P27216 316 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 GIPRP48546 466 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 STX17P56962 302 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 TRAF1Q13077 416 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 SPA17Q15506 151 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 PTGISQ16647 500 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 LONRF2Q1L5Z9 754 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 PLEKHG4Q58EX7 1191 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 HSP90B2PQ58FF3 399 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 MUM1L1Q5H9M0 696 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 SFRP5Q5T4F7 317 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 IQSEC1Q6DN90 963 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 SNRNP48Q6IEG0 339 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 PPP4R3AQ6IN85 833 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 TTI2Q6NXR4 508 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 MOXD1Q6UVY6 613 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 UNC13DQ70J99 1090 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 ZNF765Q7L2R6 523 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 TRAPPC11Q7Z392 1133 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 GRAMD1CQ8IYS0 662 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 GUF1Q8N442 669 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 RNF10Q8N5U6 811 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 CSGALNACT2Q8N6G5 542 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 TRIM58Q8NG06 486 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 CAGE1Q8TC20 777 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 SYN2Q92777 582 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 KAT2BQ92831 832 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 TSG101Q99816 390 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 TMEM47Q9BQJ4 181 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 RTP3Q9BQQ7 232 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 TUBGCP2Q9BSJ2 902 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 C11orf84Q9BUA3 381 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 TRIM9Q9C026 710 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 VCPKMTQ9H867 229 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 MRPL44Q9H9J2 332 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 IL17RBQ9NRM6 502 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 NCDNQ9UBB6 729 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 SERPINB13Q9UIV8 391 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 MAPK8IP1Q9UQF2 711 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 DAAM1Q9Y4D1 1078 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 SAR1BQ9Y6B6 198 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 SDK1Q7Z5N4 2213 aa7.02□□□□□ -1.29
ECHDC1-202ENST00000368289 KDM3AQ9Y4C1 1321 aa7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 SSU72P8A0A1W2PR75 194 aa7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 SMCO2A6NFE2 343 aa7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 NARSO43776 548 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 DNAJA2O60884 412 aa7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 LRRN2O75325 713 aa7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 LEFTY1O75610 366 aa7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 EOMESO95936 686 aa7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 AMHP03971 560 aa7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 IVLP07476 585 aa7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 TCP1P17987 556 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 TRIM21P19474 475 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 ARHGAP25P42331 645 aa7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 MRPL12P52815 198 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 NAPAP54920 295 aa7.01□□□□□ -1.29
ECHDC1-202ENST00000368289 AMPD2Q01433 879 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms