RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 PRRG3Q9BZD7 231 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 SPATA7Q9P0W8 599 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 SPANXN2Q5MJ10 180 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 KIAA1586Q9HCI6 787 aa11.48□□□□□ -0.57
CDC42BPA-205ENST00000366769 MIF4GDA9UHW6 222 aaKnown RBP11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 CLASP2O75122 1294 aaKnown RBP11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZBTB11O95625 1053 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 NR3C1P04150 777 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 SHBGP04278 402 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 CHSY1Q86X52 802 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 UXS1Q8NBZ7 420 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 NRDE2Q9H7Z3 1164 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 UTYO14607 1347 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 TNKSO95271 1327 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 AFF2P51816 1311 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 DHDDSQ86SQ9 333 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 SLC35G2Q8TBE7 412 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 USP44Q9H0E7 712 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 HDHD2Q9H0R4 259 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 ATPIF1Q9UII2 106 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 DMTF1Q9Y222 760 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 FAM9CQ8IZT9 166 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 SNX31Q8N9S9 440 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 URGCPQ8TCY9 931 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 GIN1Q9NXP7 522 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 APC2O95996 2303 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 PP2D1A8MPX8 630 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF806P0C7X5 589 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 FEN1P39748 380 aaKnown RBP11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 LSM3P62310 102 aaKnown RBP11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 TMC3Q7Z5M5 1100 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 NLRP10Q86W26 655 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 RMDN1Q96DB5 314 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 INO80Q9ULG1 1556 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 ADGRA2Q96PE1 1338 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 SMIM31A0A1B0GVY4 71 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 MAGP20916 626 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 SOAT1P35610 550 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 HPS3Q969F9 1004 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 STK33Q9BYT3 514 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 E9PCH4 1651 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 SPTLC1O15269 473 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 TFE3P19532 575 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 ITGAXP20702 1163 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 GSSP48637 474 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 MLPHQ9BV36 600 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 HMG20AQ9NP66 347 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 MRPL39Q9NYK5 338 aaKnown RBP11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF221Q9UK13 617 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 BMP10O95393 424 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 DGCR6Q14129 220 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 SYTL3Q4VX76 610 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 FAM96AQ9H5X1 160 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 A8MXQ7 604 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 POU5F1Q01860 360 aaKnown RBP11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 SIK2Q9H0K1 926 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 HPS5Q9UPZ3 1129 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 SNX17Q15036 470 aa11.47□□□□□ -0.57
CDC42BPA-205ENST00000366769 EVPLLA8MZ36 301 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 TFPTP0C1Z6 253 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 GTF2H3Q13889 308 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF284Q2VY69 593 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZFP69Q49AA0 526 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 SLC27A3Q5K4L6 730 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 GIMAP8Q8ND71 665 aaPredicted RBP11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 OSBPL6Q9BZF3 934 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 TRMT13Q9NUP7 481 aaKnown RBP11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 DNAJC12Q9UKB3 198 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 AK5Q9Y6K8 562 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 CCDC182A6NF36 153 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 HPCAP84074 193 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 CAPN6Q9Y6Q1 641 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 SHOX2O60902 331 aaPredicted RBP11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 SLC9A3P48764 834 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 CENPPQ6IPU0 288 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 RHOT2Q8IXI1 618 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 COPS7BQ9H9Q2 264 aaPredicted RBP11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 SEC24AO95486 1093 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 MAGEA4P43358 317 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 KCNJ1P48048 391 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 RPS8P62241 208 aaKnown RBP11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 C19orf18Q8NEA5 215 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 BHLHE22Q8NFJ8 381 aaPredicted RBP11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 ATXN2LQ8WWM7 1075 aaKnown RBP11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 HES6Q96HZ4 224 aa11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 WBP11Q9Y2W2 641 aaKnown RBP11.46□□□□□ -0.57
CDC42BPA-205ENST00000366769 TEX28O15482 410 aa11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 NR1H2P55055 460 aa11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 MIER2Q8N344 545 aa11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 RTL3Q8N8U3 475 aaKnown RBP11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 LSM14AQ8ND56 463 aaKnown RBP11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 NEDD4P46934 1319 aa11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 MOCS2O96007 188 aaPredicted RBP11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 FKBP3Q00688 224 aaKnown RBP11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 PABPC3Q9H361 631 aaKnown RBP11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 PRPF3O43395 683 aaKnown RBP11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 NCOA4Q13772 614 aa11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 MAPK6Q16659 721 aa11.46□□□□□ -0.58
CDC42BPA-205ENST00000366769 UMODL1Q5DID0 1318 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms