RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 VIPR2P41587 438 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 GUCY2FP51841 1108 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 YARSP54577 528 aaKnown RBP8.78□□□□□ -1
MRPL55-211ENST00000366738 MARSP56192 900 aaKnown RBP8.78□□□□□ -1
MRPL55-211ENST00000366738 ARPP19P56211 112 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 BFSP1Q12934 665 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 PSMD6Q15008 389 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 KRT31Q15323 416 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 TCP11X2Q5H9J9 407 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 WDR44Q5JSH3 913 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 MIIPQ5JXC2 388 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 STPG1Q5TH74 334 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 JADE1Q6IE81 842 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 VITQ6UXI7 678 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 ANKS3Q6ZW76 656 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 TRIM59Q8IWR1 403 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 HS6ST3Q8IZP7 471 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 SPEM1Q8N4L4 309 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 SLC35C1Q96A29 364 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 CCDC127Q96BQ5 260 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 FAM212AQ96EL1 285 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 SUSD3Q96L08 255 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 ZSWIM3Q96MP5 696 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 ACAP3Q96P50 834 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 MKNK1Q9BUB5 465 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 TRMT61BQ9BVS5 477 aaKnown RBP8.78□□□□□ -1
MRPL55-211ENST00000366738 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 MMRN2Q9H8L6 949 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 RPF1Q9H9Y2 349 aaKnown RBP8.78□□□□□ -1
MRPL55-211ENST00000366738 ZFP14Q9HCL3 533 aa8.78□□□□□ -1
MRPL55-211ENST00000366738 ZNF334Q9HCZ1 680 aaPredicted RBP8.78□□□□□ -1
MRPL55-211ENST00000366738 CACNA1EQ15878 2313 aa8.77□□□□□ -1
MRPL55-211ENST00000366738 GOLGA6L19H0YKK7 550 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 PPEF2O14830 753 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 GIPC1O14908 333 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 MAPK13O15264 365 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 TRAPPC3O43617 180 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 FOXD2O60548 495 aaPredicted RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 TOP3BO95985 862 aaKnown RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 OR4Q2P0C623 313 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 GJA1P17302 382 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 CNR2P34972 360 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 MTIF2P46199 727 aaKnown RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 SOX9P48436 509 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 VAMP7P51809 220 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 PPP2R3AQ06190 1150 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 PPP3CAQ08209 521 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 FOXC1Q12948 553 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 ZBTB6Q15916 424 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 CBWD6Q4V339 395 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 CBWD3Q5JTY5 395 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 CBWD5Q5RIA9 395 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 TCERG1LQ5VWI1 586 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 TCEAL6Q6IPX3 200 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 RNF19BQ6ZMZ0 732 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 INTS8Q75QN2 995 aaKnown RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 APBB1IPQ7Z5R6 666 aaPredicted RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 TCEAL8Q8IYN2 117 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 OR5B17Q8NGF7 314 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 PARD3BQ8TEW8 1205 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 ZNF516Q92618 1163 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 IRF7Q92985 503 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 TCEAL3Q969E4 200 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 ASB16Q96NS5 453 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 CGRRF1Q99675 332 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 CORO1BQ9BR76 489 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 ANP32EQ9BTT0 268 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 LSM14BQ9BX40 385 aaKnown RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 TMEM121BQ9BXQ6 578 aaPredicted RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 MTMR12Q9C0I1 747 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 CYP4F11Q9HBI6 524 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 KIAA1586Q9HCI6 787 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 AVENQ9NQS1 362 aaPredicted RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 SLC38A7Q9NVC3 462 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 INTS13Q9NVM9 706 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 CEP72Q9P209 647 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 MAGEC2Q9UBF1 373 aaPredicted RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 ARMCX3Q9UH62 379 aaPredicted RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 LIMA1Q9UHB6 759 aaKnown RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 TIMM13Q9Y5L4 95 aaPredicted RBP8.77□□□□□ -1.01
MRPL55-211ENST00000366738 INSL5Q9Y5Q6 135 aa8.77□□□□□ -1.01
MRPL55-211ENST00000366738 SLC38A8A6NNN8 435 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 M0QZQ0 153 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 ARNTLO00327 626 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 SYN3O14994 580 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 EPN2O95208 641 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 IL18RAPO95256 599 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 PAPSS2O95340 614 aaPredicted RBP8.76□□□□□ -1.01
MRPL55-211ENST00000366738 FGFR1OPO95684 399 aaKnown RBP8.76□□□□□ -1.01
MRPL55-211ENST00000366738 GNA14O95837 355 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 LRG1P02750 347 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 ZNF806P0C7X5 589 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 KRT13P13646 458 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 PRKCSHP14314 528 aaPredicted RBP8.76□□□□□ -1.01
MRPL55-211ENST00000366738 PTPN2P17706 415 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 PSMC3P17980 439 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 EEF1GP26641 437 aaKnown RBP8.76□□□□□ -1.01
MRPL55-211ENST00000366738 RPL9P32969 192 aaKnown RBP8.76□□□□□ -1.01
MRPL55-211ENST00000366738 GCLMP48507 274 aa8.76□□□□□ -1.01
MRPL55-211ENST00000366738 PXNP49023 591 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms