RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 BRCC3P46736 316 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 BCAT1P54687 386 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 WDR5P61964 334 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 TAP1Q03518 808 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 CKAP4Q07065 602 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 RPS6KA1Q15418 735 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 PTPN20Q4JDL3 420 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 PAN2Q504Q3 1202 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 PPP1R26Q5T8A7 1209 aaPredicted RBP14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 PLEKHA7Q6IQ23 1121 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 C16orf59Q7L2K0 433 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 CRIPAKQ8N1N5 446 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 LRRC43Q8N309 656 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 WDTC1Q8N5D0 677 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 C12orf29Q8N999 325 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 MNS1Q8NEH6 495 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 SUSD3Q96L08 255 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 CASD1Q96PB1 797 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 SYT15Q9BQS2 421 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 TLR10Q9BXR5 811 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 MTIF3Q9H2K0 278 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 DPEP3Q9H4B8 488 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 SYNCQ9H7C4 482 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 PARVAQ9NVD7 372 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 DDX43Q9NXZ2 648 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 WDR35Q9P2L0 1181 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 ANAPC7Q9UJX3 599 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 CDH9Q9ULB4 789 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 PCDHB8Q9UN66 801 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 KIAA1671Q9BY89 1806 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 TMEM110-MUSTN1A8MSY1 372 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 HCRTO43612 131 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 CYP11A1P05108 521 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 PTPN1P18031 435 aaKnown RBP14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 TYMPP19971 482 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 GPD2P43304 727 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 OR1G1P47890 313 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 GSCP56915 257 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 SNX16P57768 344 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 BST2Q10589 180 aaKnown RBP14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 PDCLQ13371 301 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 MESDQ14696 234 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 DNAJC24Q6P3W2 148 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 CD300LGQ6UXG3 332 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 NT5DC3Q86UY8 548 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 ZNF280BQ86YH2 543 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 MICALL1Q8N3F8 863 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 CEP112Q8N8E3 955 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 C3orf20Q8ND61 904 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 UBA3Q8TBC4 463 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 HASPINQ8TF76 798 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 TOP1MTQ969P6 601 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 OSBPL9Q96SU4 736 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 GOLPH3Q9H4A6 298 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 ABCB6Q9NP58 842 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 LCMT1Q9UIC8 334 aa14.62□□□□□ -0.07
PDLIM5-203ENST00000359265 CARNS1A5YM72 827 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 TBKBP1A7MCY6 615 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 MIF4GDA9UHW6 222 aaKnown RBP14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 I3L4J1 428 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 TRAPPC3O43617 180 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 B4GALT3O60512 393 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 UPP2O95045 317 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 CCDC130P13994 396 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 IGFBP6P24592 240 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 ACAT1P24752 427 aaKnown RBP14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 ADORA2BP29275 332 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 GATMP50440 423 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 PSMC1P62191 440 aaKnown RBP14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 MAMLD1Q13495 774 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 PKDCCQ504Y2 493 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 C2CD6Q53TS8 623 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 OTOP2Q7RTS6 562 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 PHLDB2Q86SQ0 1253 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 TTC30AQ86WT1 665 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 THEM5Q8N1Q8 247 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 ANKRD52Q8NB46 1076 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 FEZF2Q8TBJ5 459 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 C18orf8Q96DM3 657 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 CPXM1Q96SM3 734 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 HNRNPABQ99729 332 aaKnown RBP14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 TMEM175Q9BSA9 504 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 SELENOOQ9BVL4 669 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 COLEC11Q9BWP8 271 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 CARD6Q9BX69 1037 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 NRDE2Q9H7Z3 1164 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 CHORDC1Q9UHD1 332 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 CYTH4Q9UIA0 394 aa14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 TIMM13Q9Y5L4 95 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-203ENST00000359265 ZBBXA8MT70 800 aa14.6□□□□□ -0.07
PDLIM5-203ENST00000359265 MYO1FO00160 1098 aa14.6□□□□□ -0.07
PDLIM5-203ENST00000359265 HAX1O00165 279 aa14.6□□□□□ -0.07
PDLIM5-203ENST00000359265 CES2O00748 559 aa14.6□□□□□ -0.07
PDLIM5-203ENST00000359265 SPOPO43791 374 aa14.6□□□□□ -0.07
PDLIM5-203ENST00000359265 DGKIO75912 1065 aa14.6□□□□□ -0.07
PDLIM5-203ENST00000359265 ERBB2P04626 1255 aa14.6□□□□□ -0.07
PDLIM5-203ENST00000359265 GABRB2P47870 512 aa14.6□□□□□ -0.07
PDLIM5-203ENST00000359265 SLC8A3P57103 927 aa14.6□□□□□ -0.07
PDLIM5-203ENST00000359265 ZNF268Q14587 947 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms