RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 PPP1R1BQ9UD71 204 aaPredicted RBP13.9□□□□□ -0.18
SPTSSB-201ENST00000359175 MYO3BQ8WXR4 1341 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 MARCH6O60337 910 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 FUCA1P04066 466 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 TFPTP0C1Z6 253 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 OCM2P0CE71 109 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 OCMP0CE72 109 aaPredicted RBP13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 RFC4P35249 363 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 GPX6P59796 221 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 SLC25A3Q00325 362 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 HP1BP3Q5SSJ5 553 aaPredicted RBP13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 RWDD4Q6NW29 188 aaKnown RBP13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 CAPN12Q6ZSI9 719 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 CLIP3Q96DZ5 547 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 CNBD2Q96M20 576 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 SF3B1O75533 1304 aaKnown RBP eCLIP13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 SPATA31A5Q5VU36 1347 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 SPATA31A6Q5VVP1 1343 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 SPATA31A7Q8IWB4 1347 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 GOLGA8TH3BQL2 631 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 GOLGA8RI6L899 631 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 ATP2A1O14983 1001 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 C6orf222P0C671 652 aaPredicted RBP13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 ALDH3B2P48448 385 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 MYL7Q01449 175 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 SNRNP48Q6IEG0 339 aaKnown RBP13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 ISLR2Q6UXK2 745 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 ACTRT2Q8TDY3 377 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 SGF29Q96ES7 293 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 PAFAH2Q99487 392 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 HGH1Q9BTY7 390 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 SMYD3Q9H7B4 428 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 SLC38A7Q9NVC3 462 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 CLEC11AQ9Y240 323 aa13.89□□□□□ -0.19
SPTSSB-201ENST00000359175 TSPY3P0CV98 308 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 TSPY8P0CW00 308 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 ARPC4P59998 168 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 MORF4L2Q15014 288 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 TMEM214Q6NUQ4 689 aaKnown RBP13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 LPCAT2Q7L5N7 544 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 GSTA5Q7RTV2 222 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 POU5F2Q8N7G0 328 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 TTC17Q96AE7 1141 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 NSUN4Q96CB9 384 aaKnown RBP13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 APOPT1Q96IL0 206 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 ANO3Q9BYT9 981 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 ZNF287Q9HBT7 754 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 IGSF9Q9P2J2 1179 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 PSMD13Q9UNM6 376 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 POMPQ9Y244 141 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 SQORQ9Y6N5 450 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 MEI4A8MW99 385 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 TBC1D12O60347 775 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 MED24O75448 989 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 PHBP35232 272 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 MECOMQ03112 1051 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 KCNC4Q03721 635 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 KCNA1Q09470 495 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 ACAP1Q15027 740 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 KLHL38Q2WGJ6 581 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 PQLC1Q8N2U9 271 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 CATSPER1Q8NEC5 780 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 BORCS5Q969J3 196 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 FAM111AQ96PZ2 611 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 RANBP9Q96S59 729 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 LIN28AQ9H9Z2 209 aaKnown RBP13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 SCHIP1Q9P0W5 487 aaPredicted RBP13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 CDH22Q9UJ99 828 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 NOCTQ9UK39 431 aaKnown RBP13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 BAIAP3O94812 1187 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 GCNT3O95395 438 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 CYP2C9P11712 490 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 ALDH18A1P54886 795 aaKnown RBP13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 SLC18A2Q05940 514 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 GK3PQ14409 553 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 C12orf60Q5U649 245 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 DCAKDQ8WVC6 231 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 USP6NLQ92738 828 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 ZMAT2Q96NC0 199 aaKnown RBP13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 KLF6Q99612 283 aaPredicted RBP13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 RUSC1Q9BVN2 902 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 DRC3Q9H069 523 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 UBE2TQ9NPD8 197 aaPredicted RBP13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 MCM9Q9NXL9 1143 aa13.88□□□□□ -0.19
SPTSSB-201ENST00000359175 ASTN2O75129 1339 aaPredicted RBP13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 I3L4J1 428 aa13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 FDX1P10109 184 aa13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 RALAP11233 206 aa13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 GYS1P13807 737 aa13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 PRDX6P30041 224 aa13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 PTP4A2Q12974 167 aa13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 EFTUD2Q15029 972 aaKnown RBP eCLIP13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 ZNF829Q3KNS6 432 aaPredicted RBP13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 RALGPS1Q5JS13 557 aa13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 NIPAL1Q6NVV3 410 aa13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 AMIGO2Q86SJ2 522 aa13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 EPS8L1Q8TE68 723 aa13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 ACSS3Q9H6R3 686 aa13.87□□□□□ -0.19
SPTSSB-201ENST00000359175 MYOCOSA0A1B0GUC4 107 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms