RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 FAM228BP0C875 321 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 HNRNPH3P31942 346 aaKnown RBP11.76□□□□□ -0.53
PSEN1-202ENST00000357710 CXCR5P32302 372 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 EVI2BP34910 448 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 IFITM2Q01629 132 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 UBXN1Q04323 297 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 SF3A3Q12874 501 aaKnown RBP eCLIP11.76□□□□□ -0.53
PSEN1-202ENST00000357710 PPP2R5EQ16537 467 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 SLFN13Q68D06 897 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 PRR23CQ6ZRP0 262 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 RGS9BPQ6ZS82 235 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 KCTD20Q7Z5Y7 419 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.76□□□□□ -0.53
PSEN1-202ENST00000357710 ELMOD2Q8IZ81 293 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 SCFD2Q8WU76 684 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 TAMM41Q96BW9 452 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 SERPINB12Q96P63 405 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 RNF41Q9H4P4 317 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-202ENST00000357710 ZBTB21Q9ULJ3 1066 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 TACC3Q9Y6A5 838 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 WASF2Q9Y6W5 498 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 ACOX3O15254 700 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 ACSL4O60488 711 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 MAPKAPK2P49137 400 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 TRIM16LQ309B1 348 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 HP1BP3Q5SSJ5 553 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-202ENST00000357710 SHEQ5VZ18 495 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 SH3BP5LQ7L8J4 393 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 IFNLR1Q8IU57 520 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-202ENST00000357710 ACTRT1Q8TDG2 376 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 TRUB1Q8WWH5 349 aaKnown RBP11.76□□□□□ -0.53
PSEN1-202ENST00000357710 INTS12Q96CB8 462 aaKnown RBP11.76□□□□□ -0.53
PSEN1-202ENST00000357710 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 PITPNM3Q9BZ71 974 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 VPS45Q9NRW7 570 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 LRP2BPQ9P2M1 347 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 RWDD2AQ9UIY3 292 aa11.76□□□□□ -0.53
PSEN1-202ENST00000357710 ARHGEF35A5YM69 484 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 BTBD18B2RXH4 712 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 EXTL3O43909 919 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 RHOBTB3O94955 611 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 C8BP07358 591 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 CDC25AP30304 524 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 STT3AP46977 705 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 SP140Q13342 867 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 LEXMQ3ZCV2 418 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 SLC51AQ86UW1 340 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 FBXL16Q8N461 479 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 AFAP1L2Q8N4X5 818 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
PSEN1-202ENST00000357710 ZNF486Q96H40 463 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-202ENST00000357710 REXO5Q96IC2 774 aaKnown RBP11.75□□□□□ -0.53
PSEN1-202ENST00000357710 NEUROG2Q9H2A3 272 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 WASH6PQ9NQA3 447 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 OLFML3Q9NRN5 406 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 ASIC3Q9UHC3 531 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 ZFP69BQ9UJL9 534 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 DUSP10Q9Y6W6 482 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 ZNF532Q9HCE3 1301 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 MYH10P35580 1976 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 FAM196BA6NMK8 535 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 POTECB2RU33 542 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 H7C0C1 242 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 INO80B-WBP1J3KQ70 363 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 GYG2O15488 501 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 PRKAR1BP31321 381 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 KRT20P35900 424 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 TRIM23P36406 574 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 SLC26A3P40879 764 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 PRKCQQ04759 706 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 MOGSQ13724 837 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 THOC5Q13769 683 aaKnown RBP11.75□□□□□ -0.53
PSEN1-202ENST00000357710 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 ZNF449Q6P9G9 518 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 METTL3Q86U44 580 aaKnown RBP11.75□□□□□ -0.53
PSEN1-202ENST00000357710 LRRC6Q86X45 466 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 MAGEB6Q8N7X4 407 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 BCL7CQ8WUZ0 217 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-202ENST00000357710 MS4A14Q96JA4 679 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 TSG101Q99816 390 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 PAIP1Q9H074 479 aaKnown RBP11.75□□□□□ -0.53
PSEN1-202ENST00000357710 MLXIPQ9HAP2 919 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 SEPT3Q9UH03 358 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 TFR2Q9UP52 801 aa11.75□□□□□ -0.53
PSEN1-202ENST00000357710 C6orf229H3BNL8 230 aa11.74□□□□□ -0.53
PSEN1-202ENST00000357710 NCK2O43639 380 aa11.74□□□□□ -0.53
PSEN1-202ENST00000357710 EEF2P13639 858 aaKnown RBP11.74□□□□□ -0.53
PSEN1-202ENST00000357710 PRDX6P30041 224 aa11.74□□□□□ -0.53
PSEN1-202ENST00000357710 MAN1A1P33908 653 aa11.74□□□□□ -0.53
PSEN1-202ENST00000357710 PSMC2P35998 433 aaKnown RBP11.74□□□□□ -0.53
PSEN1-202ENST00000357710 ECT2LQ008S8 904 aa11.74□□□□□ -0.53
PSEN1-202ENST00000357710 PPARDQ03181 441 aa11.74□□□□□ -0.53
PSEN1-202ENST00000357710 TXNRD3Q86VQ6 643 aa11.74□□□□□ -0.53
PSEN1-202ENST00000357710 GALNT13Q8IUC8 556 aa11.74□□□□□ -0.53
PSEN1-202ENST00000357710 REM2Q8IYK8 340 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-202ENST00000357710 TTLQ8NG68 377 aa11.74□□□□□ -0.53
PSEN1-202ENST00000357710 U2AF1L4Q8WU68 220 aaKnown RBP11.74□□□□□ -0.53
PSEN1-202ENST00000357710 FAM172AQ8WUF8 416 aa11.74□□□□□ -0.53
PSEN1-202ENST00000357710 TTYH3Q9C0H2 523 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms