RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 PRAMEF22A3QJZ6 481 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 POLRMTO00411 1230 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 ZNF185O15231 689 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 P4HBP07237 508 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 TXNRD1Q16881 649 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 WDR72Q3MJ13 1102 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 RIN2Q8WYP3 895 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 KLHL31Q9H511 634 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 CAAP1Q9H8G2 361 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 FAM49BQ9NUQ9 324 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 PPIEQ9UNP9 301 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 TBX22Q9Y458 520 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 TM9SF1O15321 606 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 USP1O94782 785 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 RARGP13631 454 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 OR1G1P47890 313 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 ACOT2P49753 483 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 SPP2Q13103 211 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 MTM1Q13496 603 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 PDIA5Q14554 519 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 SHC4Q6S5L8 630 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 OR8H2Q8N162 312 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 CALML6Q8TD86 181 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 E2F7Q96AV8 911 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 CORO1CQ9ULV4 474 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 SNTNA6NMZ2 147 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 SLC34A1Q06495 639 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 DCAF6Q58WW2 860 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 SENP7Q9BQF6 1050 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 HMG20AQ9NP66 347 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 AGAP1Q9UPQ3 857 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 PPIDQ08752 370 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 BSDC1Q9NW68 430 aaPredicted RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 WWOXQ9NZC7 414 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 WHRNQ9P202 907 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 E9PBE3 544 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 AREL1O15033 823 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 ADARP55265 1226 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 CLEC16AQ2KHT3 1053 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 OMA1Q96E52 524 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 AGPAT1Q99943 283 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 CNOT7Q9UIV1 285 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 HEATR9A2RTY3 570 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 ERVK-10P10266 1014 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 CYP51A1Q16850 503 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 ZNF184Q99676 751 aaPredicted RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 THUMPD3Q9BV44 507 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 TIPINQ9BVW5 301 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 CATSPERBQ9H7T0 1116 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 NMRK2Q9NPI5 230 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 SAR1AQ9NR31 198 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 RNF181Q9P0P0 153 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 SNX9Q9Y5X1 595 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 PBRM1Q86U86 1689 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 PDS5AQ29RF7 1337 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 RHOBTB3O94955 611 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 PCNAP12004 261 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 EIF2B2P49770 351 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 GEMIN4P57678 1058 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 PTK7Q13308 1070 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 GSTA3Q16772 222 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 PLEKHA7Q6IQ23 1121 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 ADSSL1Q8N142 457 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 QKIQ96PU8 341 aaKnown RBP eCLIP11.92□□□□□ -0.54e-7■■■■□ 24.5
SPTBN1-202ENST00000356805 APOL4Q9BPW4 351 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 HDHD2Q9H0R4 259 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 EFCAB1Q9HAE3 211 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 TNPO2O14787 897 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 KLHL41O60662 606 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 RHOBTB1O94844 696 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 BCL10O95999 233 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 HSMCR30P0CW71 290 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 COX10Q12887 443 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 EIF2B5Q13144 721 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 FIGNQ5HY92 759 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 C4orf33Q8N1A6 199 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 HERC5Q9UII4 1024 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 GMEB1Q9Y692 573 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 DYRK3O43781 588 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 PRKCBP05771 671 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 RRM2P31350 389 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 SLC29A2Q14542 456 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 C3orf62Q6ZUJ4 267 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 SIX5Q8N196 739 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 FAM118BQ9BPY3 351 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 ACAD9Q9H845 621 aa11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 RPRD1BQ9NQG5 326 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-202ENST00000356805 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 SPRP35270 261 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 PEX5P50542 639 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 REXO1L1PQ8IX06 675 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 LRRC34Q8IZ02 419 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 SLC35G2Q8TBE7 412 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 LRRC39Q96DD0 335 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 CINPQ9BW66 212 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 STN1Q9H668 368 aaKnown RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 SPACA6W5XKT8 324 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 SLCO1B7G3V0H7 640 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms