RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PAQR9Q6ZVX9 377 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 ENGASEQ8NFI3 743 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 MYCBPAPQ8TBZ2 947 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 BPIFB1Q8TDL5 484 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 FAM3CQ92520 227 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 EEF2KMTQ96G04 330 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 TRMT2BQ96GJ1 504 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 FUBP3Q96I24 572 aaKnown RBP eCLIP17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 MYRFLQ96LU7 910 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 B3GNT5Q9BYG0 378 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 IRF2BPLQ9H1B7 796 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 SPATA6Q9NWH7 488 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 MAGEC2Q9UBF1 373 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 FGF19O95750 216 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 MYL1P05976 194 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 PTPN1P18031 435 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 RPL10AP62906 217 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 PPP3CAQ08209 521 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 MTAPQ13126 283 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 BIRC3Q13489 604 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 TAF12Q16514 161 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 ZACNQ401N2 412 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 SV2AQ7L0J3 742 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 BCO2Q9BYV7 579 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 VRTNQ9H8Y1 702 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 OBP2AQ9NY56 170 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 GCNT4Q9P109 453 aa17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 ZFHX2Q9C0A1 2572 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-201ENST00000355572 F8VP50 259 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 PHACTR2O75167 634 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 TDGF1P13385 188 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 ARSAP15289 507 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 CTHP32929 405 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 TNNC1P63316 161 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 TRPC3Q13507 836 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 NCOA4Q13772 614 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 KCNB1Q14721 858 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 ZNF699Q32M78 642 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 Q6ZS52 159 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 MON1AQ86VX9 555 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 YAF2Q8IY57 180 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 GOLGA5Q8TBA6 731 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 E2F7Q96AV8 911 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 GCNAQ96QF7 691 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 FAM83CQ9BQN1 747 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 SNX25Q9H3E2 840 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 LMAN1LQ9HAT1 526 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 APOBEC3GQ9HC16 384 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 GKN1Q9NS71 199 aa17.85■□□□□ 0.45
PDLIM7-201ENST00000355572 A8MXQ7 604 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 SPECC1L-ADORA2AF8WAN1 911 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 DPYSL4O14531 572 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 NR2F2P24468 414 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 ATICP31939 592 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 GRIK1P39086 918 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 RPS9P46781 194 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 PMS1P54277 932 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 ARHGAP29Q52LW3 1261 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 PKN3Q6P5Z2 889 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 C4orf50Q6ZRC1 276 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 GUF1Q8N442 669 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 CELF5Q8N6W0 485 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 ARL14EPQ8N8R7 260 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 B3GALNT2Q8NCR0 500 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 TMC2Q8TDI7 906 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 SYAP1Q96A49 352 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 TWNKQ96RR1 684 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 KCNK16Q96T55 309 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 CHRDQ9H2X0 955 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 EBF3Q9H4W6 596 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 FBRSL1Q9HCM7 1045 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 TRPC7Q9HCX4 862 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 R3HCC1Q9Y3T6 440 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 ATP6V1DQ9Y5K8 247 aa17.84■□□□□ 0.45
PDLIM7-201ENST00000355572 ANTXRLA6NF34 631 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 BEST1O76090 585 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 HLA-DRAP01903 254 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 ASPAP45381 313 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 GCLMP48507 274 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 CSTF1Q05048 431 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 USP4Q13107 963 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 PON2Q15165 354 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 ZNF77Q15935 545 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 NFIL3Q16649 462 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 ZNF667Q5HYK9 610 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 VSTM1Q6UX27 236 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 ZMIZ2Q8NF64 920 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 CSGALNACT1Q8TDX6 532 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 TAS1R2Q8TE23 839 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 MRPS31Q92665 395 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 NELL1Q92832 810 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 NKD2Q969F2 451 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 SPATA17Q96L03 361 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 TTLL2Q9BWV7 592 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 PRMT8Q9NR22 394 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 TDP1Q9NUW8 608 aa17.83■□□□□ 0.44
PDLIM7-201ENST00000355572 FAM186AA6NE01 2351 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 MAN2B1O00754 1011 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 LAMTOR5O43504 91 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 CALUO43852 315 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms