RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 hCG_2014768A0A024R1R8 64 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 B2RBV5 119 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 CAND2O75155 1236 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 TRIM16O95361 564 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 CENPAP49450 140 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 SLC29A2Q14542 456 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 POLD3Q15054 466 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 CLEC16AQ2KHT3 1053 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 SLC13A5Q86YT5 568 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 KAT2BQ92831 832 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 CBWD1Q9BRT8 395 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 ISCUQ9H1K1 167 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 PPCSQ9HAB8 311 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 C2orf81A6NN90 581 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 NAMPTP43490 491 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 CPA2P48052 419 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 HIST2H2ACQ16777 129 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 NBPF20Q3BBV1 942 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 HIST2H2AA3Q6FI13 130 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 BTNL9Q6UXG8 535 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 KIRREL3Q8IZU9 778 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 PHF21AQ96BD5 680 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 HES6Q96HZ4 224 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 SEC16BQ96JE7 1060 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 SLC24A3Q9HC58 644 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 H2AFY2Q9P0M6 372 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 CPA4Q9UI42 421 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 RAP1GDS1P52306 607 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 GEMP55040 296 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 MAP3K7CLP57077 242 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 DDX39BQ13838 428 aaKnown RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 TMEM132BQ14DG7 1078 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 TRIM65Q6PJ69 517 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 COL23A1Q86Y22 540 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 IL17RAQ96F46 866 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 VIPAS39Q9H9C1 493 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 GTF3C4Q9UKN8 822 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 MTO1Q9Y2Z2 717 aaKnown RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 PXDNLA1KZ92 1463 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 TECPR2O15040 1411 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 SMAPO00193 183 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 MUTP22033 750 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 FDFT1P37268 417 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 PLIN5Q00G26 463 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 CTXN3Q4LDR2 81 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 C4orf22Q6V702 233 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 OOSP2Q86WS3 158 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 KIF2BQ8N4N8 673 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 FAM136AQ96C01 138 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 CMTM5Q96DZ9 223 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 ERGIC2Q96RQ1 377 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 PNKPQ96T60 521 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 ZSWIM1Q9BR11 485 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 ROPN1BQ9BZX4 212 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 ROPN1Q9HAT0 212 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 EIF3HO15372 352 aaKnown RBP eCLIP13.71□□□□□ -0.21
SCN8A-202ENST00000355133 SOAT2O75908 522 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 CAPZA2P47755 286 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 CCDC157Q569K6 752 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 GID8Q9NWU2 228 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 ABCA6Q8N139 1617 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 DCDC2CA8MYV0 355 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 KRT16P08779 473 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 FAM83EQ2M2I3 478 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 DEFB132Q7Z7B7 95 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 NOA1Q8NC60 698 aaKnown RBP13.71□□□□□ -0.21
SCN8A-202ENST00000355133 VPS33BQ9H267 617 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 CDY2AQ9Y6F7 541 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 CDY1Q9Y6F8 540 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 MYO3AQ8NEV4 1616 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 VWA5AO00534 786 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 ADCY3O60266 1144 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 CSDE1O75534 798 aaKnown RBP13.71□□□□□ -0.21
SCN8A-202ENST00000355133 ZNF286BP0CG31 522 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 VDRP11473 427 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 TAL1P17542 331 aaPredicted RBP13.71□□□□□ -0.21
SCN8A-202ENST00000355133 PBLDP30039 288 aaPredicted RBP13.71□□□□□ -0.21
SCN8A-202ENST00000355133 EFEMP1Q12805 493 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 ERO1BQ86YB8 467 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 SCUBE2Q9NQ36 999 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 RPS6KL1Q9Y6S9 549 aa13.71□□□□□ -0.21
SCN8A-202ENST00000355133 BCORL1Q5H9F3 1711 aa13.71□□□□□ -0.22
SCN8A-202ENST00000355133 PSTPIP1O43586 416 aa13.71□□□□□ -0.22
SCN8A-202ENST00000355133 LZTS3O60299 673 aaPredicted RBP13.71□□□□□ -0.22
SCN8A-202ENST00000355133 CKMP06732 381 aa13.71□□□□□ -0.22
SCN8A-202ENST00000355133 MFSD4BQ5TF39 518 aa13.71□□□□□ -0.22
SCN8A-202ENST00000355133 ADCK1Q86TW2 530 aa13.71□□□□□ -0.22
SCN8A-202ENST00000355133 AGGF1Q8N302 714 aaeCLIP13.71□□□□□ -0.22
SCN8A-202ENST00000355133 FAM172AQ8WUF8 416 aa13.71□□□□□ -0.22
SCN8A-202ENST00000355133 ADARB2Q9NS39 739 aaKnown RBP13.71□□□□□ -0.22
SCN8A-202ENST00000355133 KRT87PA6NCN2 255 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 CCDC15Q0P6D6 951 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 VPS37AQ8NEZ2 397 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 MRPS31Q92665 395 aaKnown RBP13.7□□□□□ -0.22
SCN8A-202ENST00000355133 CHST12Q9NRB3 414 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 ZNF229Q9UJW7 825 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 RNF112Q9ULX5 631 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 ARHGEF9O43307 516 aa13.7□□□□□ -0.22
SCN8A-202ENST00000355133 PMS1P54277 932 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms