RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PPP2R2AP63151 447 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 CCNG2Q16589 344 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 DEFB115Q30KQ5 88 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 TFDP3Q5H9I0 405 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 EPS8L1Q8TE68 723 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 COPS5Q92905 334 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 YY1AP1Q9H869 796 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 CYP1A2P05177 515 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 KCNA3P22001 575 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 PDIA2Q13087 525 aaKnown RBP12.71□□□□□ -0.37
SMAD9-201ENST00000350148 SP110Q9HB58 689 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 Q9Y3F1 56 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 PCDHA3Q9Y5H8 950 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 OPLAHO14841 1288 aa12.71□□□□□ -0.38
SMAD9-201ENST00000350148 TAF1BQ53T94 588 aaPredicted RBP12.71□□□□□ -0.38
SMAD9-201ENST00000350148 LRRC38Q5VT99 294 aa12.71□□□□□ -0.38
SMAD9-201ENST00000350148 WDR59Q6PJI9 974 aa12.71□□□□□ -0.38
SMAD9-201ENST00000350148 CDK5RAP1Q96SZ6 601 aaKnown RBP12.71□□□□□ -0.38
SMAD9-201ENST00000350148 CELF4Q9BZC1 486 aaKnown RBP12.71□□□□□ -0.38
SMAD9-201ENST00000350148 TJP2Q9UDY2 1190 aa12.71□□□□□ -0.38
SMAD9-201ENST00000350148 LCA5LO95447 670 aa12.71□□□□□ -0.38
SMAD9-201ENST00000350148 XPAP23025 273 aaPredicted RBP12.71□□□□□ -0.38
SMAD9-201ENST00000350148 FDFT1P37268 417 aa12.71□□□□□ -0.38
SMAD9-201ENST00000350148 PACS2Q86VP3 889 aa12.71□□□□□ -0.38
SMAD9-201ENST00000350148 ZBTB45Q96K62 511 aaPredicted RBP12.71□□□□□ -0.38
SMAD9-201ENST00000350148 NUDCD1Q96RS6 583 aa12.71□□□□□ -0.38
SMAD9-201ENST00000350148 RBPJLQ9UBG7 517 aa12.71□□□□□ -0.38
SMAD9-201ENST00000350148 ATMINO43313 823 aaPredicted RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 AP1G2O75843 785 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 AP1B1Q10567 949 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 C1orf228Q6PIY5 440 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 ACOT1Q86TX2 421 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 C3orf20Q8ND61 904 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 ALKBH8Q96BT7 664 aaKnown RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 FSD1LQ9BXM9 530 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 KLK14Q9P0G3 267 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 MYH1P12882 1939 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 LGR5O75473 907 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 PIGRP01833 764 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 S100BP04271 92 aaPredicted RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 DYNC1I2Q13409 638 aaKnown RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 CNGA2Q16280 664 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 PTGISQ16647 500 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 NOP9Q86U38 636 aaKnown RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 SCG3Q8WXD2 468 aaKnown RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 SLITRK1Q96PX8 696 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 CYTH2Q99418 400 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 FTHL17Q9BXU8 183 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 LSM7Q9UK45 103 aaKnown RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 PCDHA2Q9Y5H9 948 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 CNTNAP2Q9UHC6 1331 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 ESYT3A0FGR9 886 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 CST8O60676 142 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 FECHP22830 423 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 SSTR3P32745 418 aaPredicted RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 RPL9P32969 192 aaKnown RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 SERPINB9P50453 376 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 KPNA1P52294 538 aaPredicted RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 TMCO4Q5TGY1 634 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 SLC51AQ86UW1 340 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 PHF13Q86YI8 300 aaPredicted RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 MAML3Q96JK9 1138 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 XAB2Q9HCS7 855 aaKnown RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 NSMCE4AQ9NXX6 385 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 PI4K2BG5E9Z4 385 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 B3GAT3O94766 335 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 TDRD10Q5VZ19 366 aaKnown RBP12.7□□□□□ -0.38
SMAD9-201ENST00000350148 SPOPLQ6IQ16 392 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 ZNF280DQ6N043 979 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 KLC3Q6P597 504 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 RAPH1Q70E73 1250 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 PPIL6Q8IXY8 311 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 ATP6V0D2Q8N8Y2 350 aa12.7□□□□□ -0.38
SMAD9-201ENST00000350148 KCNN4O15554 427 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 DUSP11O75319 330 aaKnown RBP12.69□□□□□ -0.38
SMAD9-201ENST00000350148 CCNJLQ8IV13 435 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 NOA1Q8NC60 698 aaKnown RBP12.69□□□□□ -0.38
SMAD9-201ENST00000350148 MCUR1Q96AQ8 359 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 RILPQ96NA2 401 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 DUSP10Q9Y6W6 482 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 OPHN1O60890 802 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 CAPN15O75808 1086 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 NDST1P52848 882 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 JAG1P78504 1218 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 CYP4A22Q5TCH4 519 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 NT5DC3Q86UY8 548 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 IFT43Q96FT9 208 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 BRD8Q9H0E9 1235 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.69□□□□□ -0.382e-7■■■■■ 28
SMAD9-201ENST00000350148 SMG5Q9UPR3 1016 aaKnown RBP12.69□□□□□ -0.38
SMAD9-201ENST00000350148 ZBBXA8MT70 800 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 KPNA7A9QM74 516 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 CDH16O75309 829 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 GNRH1P01148 92 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 TFRCP02786 760 aaKnown RBP12.69□□□□□ -0.38
SMAD9-201ENST00000350148 MAP3K7CLP57077 242 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 GLRA4Q5JXX5 417 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 SPDYCQ5MJ68 293 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 PHLDB3Q6NSJ2 640 aa12.69□□□□□ -0.38
SMAD9-201ENST00000350148 EFHBQ8N7U6 833 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms