RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 NR3C2P08235 984 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 MYCLP1P12525 358 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 PRKACBP22694 351 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 LPIN1Q14693 890 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 OR6P1Q8NGX9 317 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 LRRC20Q8TCA0 184 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 CHMP1AQ9HD42 196 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 DCDC2Q9UHG0 476 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 SMU1Q2TAY7 513 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 RBM44Q6ZP01 1051 aaKnown RBP11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 AGR3Q8TD06 166 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 ANKZF1Q9H8Y5 726 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 NDFIP2Q9NV92 336 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 MID2Q9UJV3 735 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 FDX1P10109 184 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 IRF1P10914 325 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 PRKACAP17612 351 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 CCR3P51677 355 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 ZNF560Q96MR9 790 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 MLPHQ9BV36 600 aaPredicted RBP11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 TRPV5Q9NQA5 729 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 MAP3K20Q9NYL2 800 aaKnown RBP11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 HAO1Q9UJM8 370 aa11.52□□□□□ -0.56
SMARCE1-202ENST00000348513 MYO3AQ8NEV4 1616 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 TADA2AO75478 443 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 EFNA5P52803 228 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 CCDC137Q6PK04 289 aaKnown RBP11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 LRRC49Q8IUZ0 686 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 OSCP1Q8WVF1 389 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 UQCC2Q9BRT2 126 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 ACAT2Q9BWD1 397 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 RNPEPL1Q9HAU8 725 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 CYP4F11Q9HBI6 524 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 SLC13A4Q9UKG4 626 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 TAF6LQ9Y6J9 622 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 MADDQ8WXG6 1647 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 CCL15-CCL14A0A0B4J2E2 113 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 GRAP2O75791 330 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 CELF2O95319 508 aaKnown RBP11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 CSF1RP07333 972 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 CHN2P52757 468 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 PRKCEQ02156 737 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 EMC2Q15006 297 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 CCL15Q16663 113 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 PUS10Q3MIT2 529 aaKnown RBP11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 FRMD5Q7Z6J6 570 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 ANKMY2Q8IV38 441 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 RHOT1Q8IXI2 618 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 KAT2BQ92831 832 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 EGFL8Q99944 293 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 TRIM9Q9C026 710 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 DEFB129Q9H1M3 183 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 HMG20AQ9NP66 347 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 RSL24D1Q9UHA3 163 aaKnown RBP11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 EPN2O95208 641 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 BNC1Q01954 994 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 FMR1Q06787 632 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 IMPG1Q17R60 797 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 SAPCD2Q86UD0 394 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 APPL2Q8NEU8 664 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 TRPC4APQ8TEL6 797 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 PBXIP1Q96AQ6 731 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 ZNF285Q96NJ3 590 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 THTPAQ9BU02 230 aa11.52□□□□□ -0.57
SMARCE1-202ENST00000348513 SRRM3A6NNA2 597 aaPredicted RBP11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 KBTBD13C9JR72 458 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 F8W8V4 182 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 FKBP6O75344 327 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 CD151P48509 253 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 VEPH1Q14D04 833 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 GRPEL2Q8TAA5 225 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 NAT14Q8WUY8 206 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 LPAR1Q92633 364 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 AGAP3Q96P47 875 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 GTF3C4Q9UKN8 822 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 CCDC162PA2VCL2 907 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 H3BRJ5 948 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 GH1P01241 217 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 RALAP11233 206 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 ANTXR2P58335 489 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 CAPRIN1Q14444 709 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 KCNV1Q6PIU1 500 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 PID1Q7Z2X4 250 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 SPATA4Q8NEY3 305 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 TJP2Q9UDY2 1190 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 MED14O60244 1454 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 TMEM132DQ14C87 1099 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 CCDC85BQ15834 202 aaPredicted RBP11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 ARMCX4Q5H9R4 360 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 HHIPL2Q6UWX4 724 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 ZCCHC7Q8N3Z6 543 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 MMGT1Q8N4V1 131 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 TTC8Q8TAM2 541 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 CYGBQ8WWM9 190 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 ATG4CQ96DT6 458 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 MS4A14Q96JA4 679 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 PARK7Q99497 189 aaKnown RBP11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 WWP1Q9H0M0 922 aa11.51□□□□□ -0.57
SMARCE1-202ENST00000348513 SMARCAD1Q9H4L7 1026 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms