RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 FAM200BP0CF97 657 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 DNAJB1P25685 340 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 GALCP54803 685 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 SMARCB1Q12824 385 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 PTP4A2Q12974 167 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 CLEC20AQ6ZU45 233 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 CCAR2Q8N163 923 aaKnown RBP28.63■■■□□ 2.17
SSBP4-202ENST00000348495 ATRIPQ8WXE1 791 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 AUTS2Q8WXX7 1259 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 FUBP3Q96I24 572 aaKnown RBP eCLIP28.63■■■□□ 2.17
SSBP4-202ENST00000348495 RHOBTB2Q9BYZ6 727 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 CSNK1G1Q9HCP0 422 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.63■■■□□ 2.17
SSBP4-202ENST00000348495 TMEM30AQ9NV96 361 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 FNIP2Q9P278 1114 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 SSX2IPQ9Y2D8 614 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 TULP2O00295 520 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 BEST1O76090 585 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 VNN2O95498 520 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 H2AFZP0C0S5 128 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 CPB1P15086 417 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 DNAJB2P25686 324 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 OR1D2P34982 312 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 CACNA2D1P54289 1103 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 ERVFC1P60507 584 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 ROR1Q01973 937 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 MLLT1Q03111 559 aaPredicted RBP28.62■■■□□ 2.17
SSBP4-202ENST00000348495 PDCLQ13371 301 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 H2AFVQ71UI9 128 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 ZSCAN30Q86W11 494 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 SPATA2LQ8IUW3 424 aaPredicted RBP28.62■■■□□ 2.17
SSBP4-202ENST00000348495 STK32AQ8WU08 396 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 POF1BQ8WVV4 589 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 TFR2Q9UP52 801 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 IRAK3Q9Y616 596 aa28.62■■■□□ 2.17
SSBP4-202ENST00000348495 ANKRD62A6NC57 917 aa28.61■■■□□ 2.17
SSBP4-202ENST00000348495 PJA2O43164 708 aa28.61■■■□□ 2.17
SSBP4-202ENST00000348495 RPL34P49207 117 aaKnown RBP28.61■■■□□ 2.17
SSBP4-202ENST00000348495 PTPN20Q4JDL3 420 aa28.61■■■□□ 2.17
SSBP4-202ENST00000348495 PMF1Q6P1K2 205 aa28.61■■■□□ 2.17
SSBP4-202ENST00000348495 ZNF662Q6ZS27 426 aa28.61■■■□□ 2.17
SSBP4-202ENST00000348495 MCOLN2Q8IZK6 566 aa28.61■■■□□ 2.17
SSBP4-202ENST00000348495 SMOQ99835 787 aa28.61■■■□□ 2.17
SSBP4-202ENST00000348495 LACRTQ9GZZ8 138 aa28.61■■■□□ 2.17
SSBP4-202ENST00000348495 ABCB6Q9NP58 842 aa28.61■■■□□ 2.17
SSBP4-202ENST00000348495 WDR27A2RRH5 827 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 MTMR11A4FU01 709 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 XPO1O14980 1071 aaKnown RBP28.6■■■□□ 2.17
SSBP4-202ENST00000348495 ZSCAN12O43309 604 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 AP1G2O75843 785 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 BDNFP23560 247 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 PLA2G4AP47712 749 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 ARPP19P56211 112 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 CREMQ03060 361 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 C1QBPQ07021 282 aaKnown RBP28.6■■■□□ 2.17
SSBP4-202ENST00000348495 CAMK1Q14012 370 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 RNF19BQ6ZMZ0 732 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 KIAA1328Q86T90 577 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 REXO1L1PQ8IX06 675 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 ZMIZ2Q8NF64 920 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 C2orf15Q8WU43 125 aaKnown RBP28.6■■■□□ 2.17
SSBP4-202ENST00000348495 VCPIP1Q96JH7 1222 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 CPXM1Q96SM3 734 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 TCF25Q9BQ70 676 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 SLC4A5Q9BY07 1137 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 PCDHB5Q9Y5E4 795 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 USP27XA6NNY8 438 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 H3BNC9 293 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 GRM6O15303 877 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 TMEM253P0C7T8 217 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 SMAD3P84022 425 aaKnown RBP28.6■■■□□ 2.17
SSBP4-202ENST00000348495 RAB33AQ14088 237 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 PPP2R2DQ66LE6 453 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 MMS22LQ6ZRQ5 1243 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 TMC7Q7Z402 723 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 C17orf53Q8N3J3 647 aaPredicted RBP28.6■■■□□ 2.17
SSBP4-202ENST00000348495 NOX5Q96PH1 765 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 TLR9Q9NR96 1032 aa28.6■■■□□ 2.17
SSBP4-202ENST00000348495 FSCN2O14926 492 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 ABLIM3O94929 683 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 CYP2F1P24903 491 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 ARHGAP25P42331 645 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 MAGEA11P43364 429 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 ERICH1Q86X53 443 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 ATAD1Q8NBU5 361 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 PPP1R13BQ96KQ4 1090 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 PGLYRP2Q96PD5 576 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 UBXN6Q9BZV1 441 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 THAP2Q9H0W7 228 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 ABI2Q9NYB9 513 aaPredicted RBP28.59■■■□□ 2.17
SSBP4-202ENST00000348495 ADAM22Q9P0K1 906 aa28.59■■■□□ 2.17
SSBP4-202ENST00000348495 TEX28O15482 410 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 GABBR2O75899 941 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 CXCL14O95715 111 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 MAP3K7CLP57077 242 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 SLC8A3P57103 927 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 PIGZQ86VD9 579 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 ZNF461Q8TAF7 563 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 SPPL2BQ8TCT7 592 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 KCNK16Q96T55 309 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms