RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 BUB1BO60566 1050 aaPredicted RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 CTAGE8P0CG41 777 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 BRD2P25440 801 aaKnown RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 CYP2C18P33260 490 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 PEX5P50542 639 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 SLC6A3Q01959 620 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 DENND1BQ6P3S1 775 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 ANKS3Q6ZW76 656 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 CTAGE6Q86UF2 777 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 CTAGE4Q8IX94 777 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 RCOR2Q8IZ40 523 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 C17orf53Q8N3J3 647 aaPredicted RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 KIAA1958Q8N8K9 716 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 DBF4BQ8NFT6 615 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 ARHGEF26Q96DR7 871 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 SLC2A13Q96QE2 648 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 CDK5RAP1Q96SZ6 601 aaKnown RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.57□□□□□ -1.26e-8■□□□□ 8.6
NUP43-201ENST00000340413 C11orf84Q9BUA3 381 aaPredicted RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 MTIF3Q9H2K0 278 aaKnown RBP7.57□□□□□ -1.2
NUP43-201ENST00000340413 FNIP2Q9P278 1114 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 SALL4Q9UJQ4 1053 aa7.57□□□□□ -1.2
NUP43-201ENST00000340413 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 M0QYV0 167 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 ATP8B1O43520 1251 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 PSEN1P49768 467 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 CLCNKBP51801 687 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 ZNF143P52747 638 aaPredicted RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 HTRA3P83110 453 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 UBE3AQ05086 875 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 TPGS2Q68CL5 300 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 PM20D1Q6GTS8 502 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 ZNF280DQ6N043 979 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 OSTM1Q86WC4 334 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 CREG2Q8IUH2 290 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 OR6B3Q8NGW1 331 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 SPPL2BQ8TCT7 592 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 HERVK_113Q902F9 699 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 TWNKQ96RR1 684 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 CNPY3Q9BT09 278 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 HTATIP2Q9BUP3 242 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 TAS2R14Q9NYV8 317 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 ADAM28Q9UKQ2 775 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 COG5Q9UP83 839 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 FAM92AA1XBS5 289 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 MACROD2A1Z1Q3 448 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 PGRMC1O00264 195 aaKnown RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 HSF2BPO75031 334 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 ATP1A1P05023 1023 aaKnown RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 ALDH2P05091 517 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 FAM200BP0CF97 657 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 NOP2P46087 812 aaKnown RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 PPP3CCP48454 512 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 RWDD2BP57060 319 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 CHMP4BP1P59074 171 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 HADHQ16836 314 aaKnown RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 PDE12Q6L8Q7 609 aaKnown RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 WDR93Q6P2C0 686 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 DAAM2Q86T65 1068 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 HDAC7Q8WUI4 952 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 NT5C3BQ969T7 300 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 HES2Q9Y543 173 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 ALG6Q9Y672 507 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 CCDC85CA6NKD9 419 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 RIOK3O14730 519 aaKnown RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 URI1O94763 535 aaPredicted RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 PNMA6AP0CW24 399 aaPredicted RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 FGFR1P11362 822 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 CD19P15391 556 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 CD58P19256 250 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 LBX1P52954 281 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 PDK2Q15119 407 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 PTPN20Q4JDL3 420 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 SEL1L2Q5TEA6 688 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 OLFML1Q6UWY5 402 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 MTERF4Q7Z6M4 381 aaKnown RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 PALB2Q86YC2 1186 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 PIK3R5Q8WYR1 880 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 SEPT11Q9NVA2 429 aaKnown RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 DDX43Q9NXZ2 648 aaKnown RBP7.56□□□□□ -1.2
NUP43-201ENST00000340413 USP3Q9Y6I4 520 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 CLUHO75153 1309 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 SCN5AQ14524 2016 aa7.56□□□□□ -1.2
NUP43-201ENST00000340413 FAM187AA6NFU0 413 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 MDM4O15151 490 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 FANCGO15287 622 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 PQBP1O60828 265 aaKnown RBP7.55□□□□□ -1.2
NUP43-201ENST00000340413 FNTAP49354 379 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 NRG1Q02297 640 aaPredicted RBP7.55□□□□□ -1.2
NUP43-201ENST00000340413 PLD1Q13393 1074 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 DHX34Q14147 1143 aaKnown RBP7.55□□□□□ -1.2
NUP43-201ENST00000340413 LRRC26Q2I0M4 334 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 TIGD5Q53EQ6 642 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 SPDYCQ5MJ68 293 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 RASIP1Q5U651 963 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 TAF3Q5VWG9 929 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 ARMC3Q5W041 872 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 OVOS1Q6IE37 1185 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 FAM35AQ86V20 835 aa7.55□□□□□ -1.2
NUP43-201ENST00000340413 HNRNPLLQ8WVV9 542 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms