RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 RRN3P2A6NIE6 340 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 TJP3O95049 919 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 GNL1P36915 607 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 BCAR1P56945 870 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 TMED2Q15363 201 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 ZKSCAN8Q15776 578 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 BBS9Q3SYG4 887 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 ZC3H12AQ5D1E8 599 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 DARS2Q6PI48 645 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 ZDHHC24Q6UX98 284 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 C10orf67Q8IYJ2 551 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 NRCAMQ92823 1304 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 RBM41Q96IZ5 413 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 GRHL1Q9NZI5 618 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 CDY2AQ9Y6F7 541 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 DICER1Q9UPY3 1922 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 LRCH4O75427 683 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 PRKCZQ05513 592 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 LRRC31Q6UY01 552 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 DSTYKQ6XUX3 929 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 IFNL1Q8IU54 200 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 ATL2Q8NHH9 583 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 SNF8Q96H20 258 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 SLITRK1Q96PX8 696 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 ASB7Q9H672 318 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 PIH1D1Q9NWS0 290 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 STRIP2Q9ULQ0 834 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 TTLL3Q9Y4R7 772 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 RASGRF2O14827 1237 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 TRPA1O75762 1119 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 CYP3A5P20815 502 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 SDC4P31431 198 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 IRAK1P51617 712 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 SOX4Q06945 474 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 PPP2R5EQ16537 467 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 FBXO47Q5MNV8 452 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 SAPCD2Q86UD0 394 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 FAM131BQ86XD5 332 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 ZBED8Q8IZ13 594 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 C3orf20Q8ND61 904 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 MORC4Q8TE76 937 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 GRK7Q8WTQ7 553 aa10.69□□□□□ -0.7
RBFOX1-202ENST00000340209 SMIM28A0A1B0GU29 152 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 TFE3P19532 575 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 SCNN1GP51170 649 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 GAD2Q05329 585 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 PTP4A2Q12974 167 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 APBB1IPQ7Z5R6 666 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 XYLT1Q86Y38 959 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 STKLD1Q8NE28 680 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 APPL2Q8NEU8 664 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 FAM172AQ8WUF8 416 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 CWC15Q9P013 229 aaKnown RBP10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 USP18Q9UMW8 372 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 IPPQ9Y573 584 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 MANSC4A6NHS7 340 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 PSTPIP1O43586 416 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 ZNF132P52740 706 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 HTRA3P83110 453 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 ARRDC4Q8NCT1 418 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 OSBPL7Q9BZF2 842 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 ITGA11Q9UKX5 1188 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 CAPN9O14815 690 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 SPTLC1O15269 473 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 CREB3O43889 395 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 VIMP08670 466 aaKnown RBP10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 ZNF865P0CJ78 1059 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 POU5F1Q01860 360 aaKnown RBP10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 PIGHQ14442 188 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 WSCD1Q658N2 575 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 SPATA18Q8TC71 538 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 RBM15Q96T37 977 aaKnown RBP eCLIP10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 RHOBTB2Q9BYZ6 727 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 GPBP1L1Q9HC44 474 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 TMPRSS4Q9NRS4 437 aa10.68□□□□□ -0.7
RBFOX1-202ENST00000340209 SCN1AP35498 2009 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 TRIP11Q15643 1979 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 FSCN2O14926 492 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 MTA2O94776 668 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 F2P00734 622 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 VDRP11473 427 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 GPD1P21695 349 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 CD52P31358 61 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 ARPP19P56211 112 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 EIF3EP60228 445 aaKnown RBP10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 FASTKD3Q14CZ7 662 aaKnown RBP10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 SIX1Q15475 284 aaPredicted RBP10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 DCAF4L1Q3SXM0 396 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 MDH1BQ5I0G3 518 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 HOOK3Q86VS8 718 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 TTC30AQ86WT1 665 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 SRRM1Q8IYB3 904 aaKnown RBP10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 MAIP1Q8WWC4 291 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 GJD2Q9UKL4 321 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 CITO14578 2027 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 A6NJR5 290 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 KPNA7A9QM74 516 aa10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 LSM8O95777 96 aaKnown RBP10.67□□□□□ -0.7
RBFOX1-202ENST00000340209 AKR1A1P14550 325 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms