RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 MYH10P35580 1976 aa22.76■■□□□ 1.23
TPM1-204ENST00000334895 RCCD1A6NED2 376 aa22.76■■□□□ 1.23
TPM1-204ENST00000334895 OR1D2P34982 312 aa22.76■■□□□ 1.23
TPM1-204ENST00000334895 ROR1Q01973 937 aa22.76■■□□□ 1.23
TPM1-204ENST00000334895 PDE4CQ08493 712 aa22.76■■□□□ 1.23
TPM1-204ENST00000334895 PPP2R2DQ66LE6 453 aa22.76■■□□□ 1.23
TPM1-204ENST00000334895 SLC35F5Q8WV83 523 aa22.76■■□□□ 1.23
TPM1-204ENST00000334895 DUSP16Q9BY84 665 aa22.76■■□□□ 1.23
TPM1-204ENST00000334895 SLC28A3Q9HAS3 691 aa22.76■■□□□ 1.23
TPM1-204ENST00000334895 PPP2R2CQ9Y2T4 447 aa22.76■■□□□ 1.23
TPM1-204ENST00000334895 WDR27A2RRH5 827 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 RTN2O75298 545 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 FTLP02792 175 aaPredicted RBP22.75■■□□□ 1.23
TPM1-204ENST00000334895 CPB1P15086 417 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 BDNFP23560 247 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 MAGEA1P43355 309 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 BCAT1P54687 386 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 UBE3AQ05086 875 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 BST2Q10589 180 aaKnown RBP22.75■■□□□ 1.23
TPM1-204ENST00000334895 NFE2Q16621 373 aaPredicted RBP22.75■■□□□ 1.23
TPM1-204ENST00000334895 RNF19BQ6ZMZ0 732 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 CLEC20AQ6ZU45 233 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 ZMIZ2Q8NF64 920 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 KIAA1524Q8TCG1 905 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 PGLYRP2Q96PD5 576 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 SMOQ99835 787 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 TCF25Q9BQ70 676 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 RXFP1Q9HBX9 757 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 PCDHGC5Q9Y5F6 944 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 MTMR11A4FU01 709 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 AP1G2O75843 785 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 IPO7O95373 1038 aaKnown RBP22.75■■□□□ 1.23
TPM1-204ENST00000334895 CCDC175P0C221 793 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 FAM200BP0CF97 657 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 NPR3P17342 541 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 KRT83P78385 493 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 PTP4A2Q12974 167 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 PDCLQ13371 301 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 PTPN20Q4JDL3 420 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 C2CD6Q53TS8 623 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 PMF1Q6P1K2 205 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 C4orf50Q6ZRC1 276 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 MON1BQ7L1V2 547 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 PHF13Q86YI8 300 aaPredicted RBP22.75■■□□□ 1.23
TPM1-204ENST00000334895 SPATA2LQ8IUW3 424 aaPredicted RBP22.75■■□□□ 1.23
TPM1-204ENST00000334895 C17orf53Q8N3J3 647 aaPredicted RBP22.75■■□□□ 1.23
TPM1-204ENST00000334895 ATAD1Q8NBU5 361 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 SMARCD1Q96GM5 515 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 TTYH1Q9H313 450 aaPredicted RBP22.75■■□□□ 1.23
TPM1-204ENST00000334895 CRISPLD1Q9H336 500 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 ABI2Q9NYB9 513 aaPredicted RBP22.75■■□□□ 1.23
TPM1-204ENST00000334895 TJP2Q9UDY2 1190 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 CEP83Q9Y592 693 aa22.75■■□□□ 1.23
TPM1-204ENST00000334895 USP27XA6NNY8 438 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 H3BNC9 293 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 FSCN2O14926 492 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 TEX28O15482 410 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 GABBR2O75899 941 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 MMP8P22894 467 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 CYP2F1P24903 491 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 NSFP46459 744 aaKnown RBP22.74■■□□□ 1.23
TPM1-204ENST00000334895 VAV2P52735 878 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 GALCP54803 685 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 CFAP221Q4G0U5 840 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 TMC7Q7Z402 723 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 TTC9BQ8N6N2 239 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 CPXM1Q96SM3 734 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 KCNK16Q96T55 309 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 LACRTQ9GZZ8 138 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 TLR9Q9NR96 1032 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 FNIP2Q9P278 1114 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 ATG2AQ2TAZ0 1938 aa22.74■■□□□ 1.23
TPM1-204ENST00000334895 EPOPA6NHQ4 379 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 CSPG5O95196 566 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 CXCL14O95715 111 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 CNPP09543 421 aaKnown RBP22.73■■□□□ 1.23
TPM1-204ENST00000334895 SETSIPP0DME0 302 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 IRS1P35568 1242 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 GPM6BQ13491 265 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 C10orf76Q5T2E6 689 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 ZNF697Q5TEC3 545 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 MMS22LQ6ZRQ5 1243 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 MCOLN2Q8IZK6 566 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 FUBP3Q96I24 572 aaKnown RBP eCLIP22.73■■□□□ 1.23
TPM1-204ENST00000334895 FAM161BQ96MY7 647 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 C11orf70Q9BRQ4 267 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 ZNF576Q9H609 170 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 CSNK1G1Q9HCP0 422 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 ENTPD7Q9NQZ7 604 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.73■■□□□ 1.23
TPM1-204ENST00000334895 PCDHB5Q9Y5E4 795 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 IRAK3Q9Y616 596 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 PATJQ8NI35 1801 aa22.73■■□□□ 1.23
TPM1-204ENST00000334895 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.72■■□□□ 1.23
TPM1-204ENST00000334895 HIDE1A8MVS5 230 aa22.72■■□□□ 1.23
TPM1-204ENST00000334895 XPO1O14980 1071 aaKnown RBP22.72■■□□□ 1.23
TPM1-204ENST00000334895 ABLIM3O94929 683 aa22.72■■□□□ 1.23
TPM1-204ENST00000334895 ABL1P00519 1130 aa22.72■■□□□ 1.23
TPM1-204ENST00000334895 H2AFZP0C0S5 128 aa22.72■■□□□ 1.23
TPM1-204ENST00000334895 PLA2G4AP47712 749 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms