RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 C10orf120Q5SQS8 335 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 KIF2BQ8N4N8 673 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 TTC30BQ8N4P2 665 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 MUC3BQ9H195 1237 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 PIDD1Q9HB75 910 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 SREBF2Q12772 1141 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 FKBP1CQ5VVH2 108 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 TMBIM4Q9HC24 238 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 PIK3CDO00329 1044 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 SMIM24O75264 130 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 TGFB3P10600 412 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 SKIP12755 728 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 ACAT1P24752 427 aaKnown RBP13.56□□□□□ -0.24
VSTM4-202ENST00000332853 DNAJC3Q13217 504 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 STX3Q13277 289 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 IMPG1Q17R60 797 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 DDX27Q96GQ7 796 aaKnown RBP13.56□□□□□ -0.24
VSTM4-202ENST00000332853 VPS33BQ9H267 617 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 SUN2Q9UH99 717 aa13.56□□□□□ -0.24
VSTM4-202ENST00000332853 TTC36A6NLP5 189 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 TMEM132BQ14DG7 1078 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 BOLA3Q53S33 107 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 NT5DC3Q86UY8 548 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 LCA5Q86VQ0 697 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
VSTM4-202ENST00000332853 KLC4Q9NSK0 619 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 DPYSL4O14531 572 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 IRF6O14896 467 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 MMP14P50281 582 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 ERVK-9P63128 1117 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 KRT33BQ14525 404 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 ZNF669Q96BR6 464 aaPredicted RBP13.55□□□□□ -0.24
VSTM4-202ENST00000332853 FAM84AQ96KN4 292 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.55□□□□□ -0.24
VSTM4-202ENST00000332853 PRRG1O14668 218 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 MICAL2O94851 1124 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 ITGB5P18084 799 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 SLC26A2P50443 739 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 C11orf63Q6NUN7 778 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 TATDN1Q6P1N9 297 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 CREG2Q8IUH2 290 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 LRRC34Q8IZ02 419 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 EFHBQ8N7U6 833 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 ARHGEF38Q9NXL2 777 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 OVGP1Q12889 678 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 ARSHQ5FYA8 562 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 ERP27Q96DN0 273 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 TSPAN16Q9UKR8 245 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 RNF225M0QZC1 329 aaPredicted RBP13.55□□□□□ -0.24
VSTM4-202ENST00000332853 ADCY3O60266 1144 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 SASH3O75995 380 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 POLBP06746 335 aa13.55□□□□□ -0.24
VSTM4-202ENST00000332853 ADAMTS3O15072 1205 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 POMCP01189 267 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 SNRPAP09012 282 aaKnown RBP13.54□□□□□ -0.24
VSTM4-202ENST00000332853 MORF4L2Q15014 288 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 EFTUD2Q15029 972 aaKnown RBP eCLIP13.54□□□□□ -0.24
VSTM4-202ENST00000332853 MTHFD1LQ6UB35 978 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 VSIG10LQ86VR7 867 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 ARMC2Q8NEN0 867 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 ULK4Q96C45 1275 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 CATSPERBQ9H7T0 1116 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 L3MBTL1Q9Y468 752 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 TLR2O60603 784 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 PMPCBO75439 489 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 AVPR1AP37288 418 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 RNF180Q86T96 592 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 DCP1BQ8IZD4 617 aaKnown RBP13.54□□□□□ -0.24
VSTM4-202ENST00000332853 ZNF384Q8TF68 577 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 NCLNQ969V3 563 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 CEP41Q9BYV8 373 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 TRPV6Q9H1D0 765 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 UPF3AQ9H1J1 476 aaKnown RBP13.54□□□□□ -0.24
VSTM4-202ENST00000332853 UBIAD1Q9Y5Z9 338 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 BCL9LQ86UU0 1499 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 YDJCA8MPS7 323 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 TRIM49D1C9J1S8 452 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 CXCL11O14625 94 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 KDM7AQ6ZMT4 941 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 LONP2Q86WA8 852 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 SLC26A7Q8TE54 656 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 SGSM3Q96HU1 749 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 WWP1Q9H0M0 922 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 WHRNQ9P202 907 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 SCOCQ9UIL1 159 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 GPR182O15218 404 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 GFAPP14136 432 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 PTENP60484 403 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 EXD1Q8NHP7 514 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 SERPINB12Q96P63 405 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 FAM167BQ9BTA0 163 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 SEMA4AQ9H3S1 761 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 PTGER2P43116 358 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 CHI3L2Q15782 390 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 TRPM8Q7Z2W7 1104 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 GLT1D1Q96MS3 346 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 FAM111AQ96PZ2 611 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 FAM96AQ9H5X1 160 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 C10orf88Q9H8K7 445 aa13.54□□□□□ -0.24
VSTM4-202ENST00000332853 PDE2AO00408 941 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms