RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 DYNLT1P63172 113 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 PLCB3Q01970 1234 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 GPS1Q13098 491 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 ACAP1Q15027 740 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 GPR162Q16538 588 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 TAZQ16635 292 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 CCDC38Q502W7 563 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 LCLAT1Q6UWP7 414 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 CATSPER4Q7RTX7 472 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 TMEM121Q9BTD3 319 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 GCOM2Q9BZD3 368 aaPredicted RBP18.28■□□□□ 0.52
DDX28-201ENST00000332395 PLEKHA5Q9HAU0 1116 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 PCSK1NQ9UHG2 260 aa18.28■□□□□ 0.52
DDX28-201ENST00000332395 PCNTO95613 3336 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 RALGAPA2Q2PPJ7 1873 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 SLC15A5A6NIM6 579 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 DYNC1LI2O43237 492 aaPredicted RBP18.27■□□□□ 0.52
DDX28-201ENST00000332395 CST8O60676 142 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 GPR32O75388 356 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 RNF8O76064 485 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 MIPP30301 263 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 PSMC4P43686 418 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 SLC27A1Q6PCB7 646 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 CEP128Q6ZU80 1094 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 APBB1IPQ7Z5R6 666 aaPredicted RBP18.27■□□□□ 0.52
DDX28-201ENST00000332395 EXOC3L1Q86VI1 746 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 C12orf29Q8N999 325 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 ATXN2LQ8WWM7 1075 aaKnown RBP18.27■□□□□ 0.52
DDX28-201ENST00000332395 C9orf72Q96LT7 481 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 ZMAT2Q96NC0 199 aaKnown RBP18.27■□□□□ 0.52
DDX28-201ENST00000332395 SAE1Q9UBE0 346 aaPredicted RBP18.27■□□□□ 0.52
DDX28-201ENST00000332395 TPX2Q9ULW0 747 aaKnown RBP18.27■□□□□ 0.52
DDX28-201ENST00000332395 DERAQ9Y315 318 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 TRIP11Q15643 1979 aa18.27■□□□□ 0.52
DDX28-201ENST00000332395 ATXN2Q99700 1313 aaKnown RBP18.27■□□□□ 0.52
DDX28-201ENST00000332395 A6NJR5 290 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 SGK1O00141 431 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 TCEA3O75764 348 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 CD48P09326 243 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 SMIM10L2AP0DMW4 78 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 SMIM10L2BP0DMW5 78 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 OTUD4Q01804 1114 aaKnown RBP18.27■□□□□ 0.51
DDX28-201ENST00000332395 BBS12Q6ZW61 710 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 ACTL9Q8TC94 416 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 PPP1R13LQ8WUF5 828 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 SNX27Q96L92 541 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 EIF2AQ9BY44 585 aaKnown RBP18.27■□□□□ 0.51
DDX28-201ENST00000332395 CDHR5Q9HBB8 845 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 PCDH9Q9HC56 1237 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 USP18Q9UMW8 372 aa18.27■□□□□ 0.51
DDX28-201ENST00000332395 ZNF236Q9UL36 1845 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 E5RJQ4 531 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 PIK3R2O00459 728 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 F2P00734 622 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 HNRNPH1P31943 449 aaKnown RBP18.26■□□□□ 0.51
DDX28-201ENST00000332395 MAGEA4P43358 317 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 ZNF143P52747 638 aaPredicted RBP18.26■□□□□ 0.51
DDX28-201ENST00000332395 CDC42EP1Q00587 391 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 QPCTQ16769 361 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 PRAMEF19Q5SWL8 479 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 MICALCLQ6ZW33 695 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 C2orf69Q8N8R5 385 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 TTC13Q8NBP0 860 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 KCTD6Q8NC69 237 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 OSMRQ99650 979 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 INTS9Q9NV88 658 aaKnown RBP18.26■□□□□ 0.51
DDX28-201ENST00000332395 ASNSD1Q9NWL6 643 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 SLC5A4Q9NY91 659 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 CTNNAL1Q9UBT7 734 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 SNX9Q9Y5X1 595 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 NRCAMQ92823 1304 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 SCN1AP35498 2009 aa18.26■□□□□ 0.51
DDX28-201ENST00000332395 C5orf60A6NFR6 353 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 PPEF2O14830 753 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 ECM2O94769 699 aaPredicted RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 TRUB2O95900 331 aaKnown RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 IFNB1P01574 187 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 PFKMP08237 780 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 ATP5DP30049 168 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 MORF4L2Q15014 288 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 STILQ15468 1287 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 TAF5Q15542 800 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 NOTUMQ6P988 496 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 FAM183BPQ6ZVS7 135 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 CMASQ8NFW8 434 aaPredicted RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 HSPH1Q92598 858 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 ARHGEF2Q92974 986 aaKnown RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 MRPL45Q9BRJ2 306 aaKnown RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 FRMD8P1Q9BZ68 369 aaPredicted RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 TUBGCP4Q9UGJ1 667 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 HES2Q9Y543 173 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 CELF2O95319 508 aaKnown RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 PECAM1P16284 738 aaPredicted RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 GPD1P21695 349 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 PCK1P35558 622 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 YARSP54577 528 aaKnown RBP18.25■□□□□ 0.51
DDX28-201ENST00000332395 GOLGA7BQ2TAP0 167 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 OR6B2Q6IFH4 312 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 CCDC91Q7Z6B0 441 aa18.25■□□□□ 0.51
DDX28-201ENST00000332395 CNPY4Q8N129 248 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms