RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 CYP26A1O43174 497 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 VDRP11473 427 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 GRIK1P39086 918 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 JAM2P57087 298 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 ITIH3Q06033 890 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 LEXMQ3ZCV2 418 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 SGO2Q562F6 1265 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 FAM71AQ8IYT1 594 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 KCNK16Q96T55 309 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 KRT82Q9NSB4 513 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 HCFC1R1Q9NWW0 138 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 KIAA1257Q9ULG3 409 aa27.53■■■□□ 2
SMDT1-201ENST00000331479 F8VP50 259 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 AP1G2O75843 785 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 BEST1O76090 585 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 BRD2P25440 801 aaKnown RBP27.52■■■□□ 2
SMDT1-201ENST00000331479 CLCN1P35523 988 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 EPHB3P54753 998 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 CES5AQ6NT32 575 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 SMARCD1Q96GM5 515 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 SMOQ99835 787 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 USP15Q9Y4E8 981 aaPredicted RBP27.52■■■□□ 2
SMDT1-201ENST00000331479 ATP8B3O60423 1300 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 O00370 1275 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 XYLBO75191 536 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 PLD1Q13393 1074 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 SARM1Q6SZW1 724 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 GRASPQ7Z6J2 395 aaPredicted RBP27.52■■■□□ 2
SMDT1-201ENST00000331479 ZMIZ2Q8NF64 920 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 PIDD1Q9HB75 910 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 THEGQ9P2T0 379 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 DNMT3BQ9UBC3 853 aaKnown RBP27.52■■■□□ 2
SMDT1-201ENST00000331479 DAAM1Q9Y4D1 1078 aa27.52■■■□□ 2
SMDT1-201ENST00000331479 DOCK6Q96HP0 2047 aa27.51■■■□□ 2
SMDT1-201ENST00000331479 CBFA2T2O43439 604 aa27.51■■□□□ 1.99
SMDT1-201ENST00000331479 MBTPS2O43462 519 aa27.51■■□□□ 1.99
SMDT1-201ENST00000331479 POU2F2P09086 479 aa27.51■■□□□ 1.99
SMDT1-201ENST00000331479 FAM200BP0CF97 657 aa27.51■■□□□ 1.99
SMDT1-201ENST00000331479 SSTR3P32745 418 aaPredicted RBP27.51■■□□□ 1.99
SMDT1-201ENST00000331479 RPL10AP62906 217 aaKnown RBP27.51■■□□□ 1.99
SMDT1-201ENST00000331479 NTHL1P78549 312 aa27.51■■□□□ 1.99
SMDT1-201ENST00000331479 SMAD4Q13485 552 aaKnown RBP27.51■■□□□ 1.99
SMDT1-201ENST00000331479 GPIHBP1Q8IV16 184 aa27.51■■□□□ 1.99
SMDT1-201ENST00000331479 SUSD6Q92537 303 aa27.51■■□□□ 1.99
SMDT1-201ENST00000331479 TSPAN16Q9UKR8 245 aa27.51■■□□□ 1.99
SMDT1-201ENST00000331479 TPM3P06753 285 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 GNA15P30679 374 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 MAP3K7CLP57077 242 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 MTMR3Q13615 1198 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 GOLGA7BQ2TAP0 167 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 CLEC20AQ6ZU45 233 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 DNAJB7Q7Z6W7 309 aaPredicted RBP27.5■■□□□ 1.99
SMDT1-201ENST00000331479 SLC47A2Q86VL8 602 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 TTC30AQ86WT1 665 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 PSMG2Q969U7 264 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 C8orf48Q96LL4 319 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 ZNF512Q96ME7 567 aaPredicted RBP27.5■■□□□ 1.99
SMDT1-201ENST00000331479 SPAG5Q96R06 1193 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 TTYH3Q9C0H2 523 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 CSNK1G1Q9HCP0 422 aa27.5■■□□□ 1.99
SMDT1-201ENST00000331479 TRIM66O15016 1216 aa27.49■■□□□ 1.99
SMDT1-201ENST00000331479 ATAT1Q5SQI0 421 aa27.49■■□□□ 1.99
SMDT1-201ENST00000331479 SMYD5Q6GMV2 418 aa27.49■■□□□ 1.99
SMDT1-201ENST00000331479 CYP26C1Q6V0L0 522 aa27.49■■□□□ 1.99
SMDT1-201ENST00000331479 CACNA2D4Q7Z3S7 1137 aa27.49■■□□□ 1.99
SMDT1-201ENST00000331479 HS6ST3Q8IZP7 471 aa27.49■■□□□ 1.99
SMDT1-201ENST00000331479 CORO1BQ9BR76 489 aa27.49■■□□□ 1.99
SMDT1-201ENST00000331479 DUSP16Q9BY84 665 aa27.49■■□□□ 1.99
SMDT1-201ENST00000331479 DMAP1Q9NPF5 467 aaPredicted RBP27.49■■□□□ 1.99
SMDT1-201ENST00000331479 MYH10P35580 1976 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 NPR3P17342 541 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 CNGA2Q16280 664 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 LCLAT1Q6UWP7 414 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 ELMOD1Q8N336 334 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 ANKRD52Q8NB46 1076 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 ZNF606Q8WXB4 792 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 BAP1Q92560 729 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 SPATA17Q96L03 361 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.48■■□□□ 1.99
SMDT1-201ENST00000331479 ASB3Q9Y575 518 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 NOTCH4Q99466 2003 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 THAP12O43422 761 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 GFPT2O94808 682 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 CFHP08603 1231 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 HMGA1P17096 107 aaKnown RBP27.48■■□□□ 1.99
SMDT1-201ENST00000331479 PTPN2P17706 415 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 ANXA13P27216 316 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 SOX5P35711 763 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 KCNQ1P51787 676 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 PTK2Q05397 1052 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 VEPH1Q14D04 833 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 PTCRAQ6ISU1 281 aaPredicted RBP27.48■■□□□ 1.99
SMDT1-201ENST00000331479 UBA3Q8TBC4 463 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 RIPOR3Q96MK2 946 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 LRRC3Q9BY71 257 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 TRIM5Q9C035 493 aa27.48■■□□□ 1.99
SMDT1-201ENST00000331479 ZNF334Q9HCZ1 680 aaPredicted RBP27.48■■□□□ 1.99
SMDT1-201ENST00000331479 SLC38A8A6NNN8 435 aa27.47■■□□□ 1.99
SMDT1-201ENST00000331479 MICAL2O94851 1124 aa27.47■■□□□ 1.99
SMDT1-201ENST00000331479 RHOP08100 348 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms