RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 GALNT4Q8N4A0 578 aa3.97□□□□□ -1.77
CBX3P1-201ENST00000325243 CPA6Q8N4T0 437 aa3.97□□□□□ -1.77
CBX3P1-201ENST00000325243 TERB1Q8NA31 727 aa3.97□□□□□ -1.77
CBX3P1-201ENST00000325243 C16orf52Q8NHV5 167 aa3.97□□□□□ -1.77
CBX3P1-201ENST00000325243 XAGE5Q8WWM1 108 aa3.97□□□□□ -1.77
CBX3P1-201ENST00000325243 VCPIP1Q96JH7 1222 aa3.97□□□□□ -1.77
CBX3P1-201ENST00000325243 LENG8Q96PV6 779 aaPredicted RBP3.97□□□□□ -1.77
CBX3P1-201ENST00000325243 WDCPQ9H6R7 721 aa3.97□□□□□ -1.77
CBX3P1-201ENST00000325243 POLHQ9Y253 713 aa3.97□□□□□ -1.77
CBX3P1-201ENST00000325243 GABRDO14764 452 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 USP1O94782 785 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 ARIH2O95376 493 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 ATXN1LP0C7T5 689 aaKnown RBP3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 PRF1P14222 555 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 FPR3P25089 353 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 PXNP49023 591 aaPredicted RBP3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 RENBPP51606 427 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 GTF2H3Q13889 308 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 RBMS2Q15434 407 aaKnown RBP3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 LONRF3Q496Y0 759 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 CERKLQ49MI3 558 aaPredicted RBP3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 ABHD11Q8NFV4 315 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 NSMCE1Q8WV22 266 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 MARK4Q96L34 752 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 SNX18Q96RF0 628 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 FAM118BQ9BPY3 351 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 PTDSS2Q9BVG9 487 aa3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 CCDC8Q9H0W5 538 aaPredicted RBP3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 FEZ2Q9UHY8 353 aaPredicted RBP3.96□□□□□ -1.78
CBX3P1-201ENST00000325243 TCRBV5S1A1TA0A578 114 aa3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 ZRANB2O95218 330 aaKnown RBP eCLIP3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 CHRM5P08912 532 aaPredicted RBP3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 HOXD9P28356 352 aaPredicted RBP3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 HK3P52790 923 aa3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 TPTEP56180 551 aa3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 HTRA4P83105 476 aaPredicted RBP3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 EXOSC9Q06265 439 aaKnown RBP3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 MTMR1Q13613 665 aa3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 ZNF268Q14587 947 aaPredicted RBP3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 MEX3CQ5U5Q3 659 aaKnown RBP3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 KIAA1161Q6NSJ0 714 aa3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 LAYNQ6UX15 382 aa3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 SLC13A1Q9BZW2 595 aa3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 CIPCQ9C0C6 399 aa3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 SPC25Q9HBM1 224 aa3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 CCNL1Q9UK58 526 aaPredicted RBP3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 GABRQQ9UN88 632 aa3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 PCDHA1Q9Y5I3 950 aa3.95□□□□□ -1.78
CBX3P1-201ENST00000325243 FAM90A10PA6NDY2 464 aa3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 SLC16A6O15403 523 aa3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 ALDH5A1P51649 535 aaPredicted RBP3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 NANOS2P60321 138 aaKnown RBP3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 IQCB1Q15051 598 aa3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 RNASE12Q5GAN4 147 aaKnown RBP3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 C10orf25Q5T742 122 aa3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 L1TD1Q5T7N2 865 aaKnown RBP3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 EFCAB2Q5VUJ9 269 aa3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 SERPINA13PQ6UXR4 307 aa3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 ZNF813Q6ZN06 617 aa3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 PCSK9Q8NBP7 692 aaKnown RBP3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 SOCS4Q8WXH5 440 aa3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 EFHD1Q9BUP0 239 aa3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 NDRG4Q9ULP0 352 aaKnown RBP3.94□□□□□ -1.78
CBX3P1-201ENST00000325243 UBE2Q2LH0YL09 131 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 hCG_1984214I3L0E3 225 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 UNC5CO95185 931 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 ALPLP05186 524 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 CSF1RP07333 972 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 TMEM191BP0C7N4 346 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 TYRP14679 529 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 HDCP19113 662 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 THBS3P49746 956 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 GUCY2FP51841 1108 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 ITKQ08881 620 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 E2F2Q14209 437 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 CYP1B1Q16678 543 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 TBC1D25Q3MII6 688 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 LEXMQ3ZCV2 418 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 THEMIS2Q5TEJ8 643 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 PIP4P1Q86T03 277 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 PNMA8AQ86V59 439 aaPredicted RBP3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 SMRP1Q8NCR6 262 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 LMBRD1Q9NUN5 540 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 ASIC5Q9NY37 505 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 WWOXQ9NZC7 414 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 MRPS17Q9Y2R5 130 aaKnown RBP3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 NOTCH4Q99466 2003 aa3.93□□□□□ -1.78
CBX3P1-201ENST00000325243 DSCR3O14972 297 aa3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 ABLIM3O94929 683 aa3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 VNN1O95497 513 aa3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 FTLP02792 175 aaPredicted RBP3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 CDK11BP21127 795 aaKnown RBP3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 SCP2P22307 547 aa3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 MAP2K6P52564 334 aa3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 TWIST1Q15672 202 aa3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 FAM187BQ17R55 369 aa3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 DEPDC1Q5TB30 811 aa3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 DPY19L3Q6ZPD9 716 aa3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 BCDIN3DQ7Z5W3 292 aaKnown RBP3.92□□□□□ -1.78
CBX3P1-201ENST00000325243 ACRBPQ8NEB7 543 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms