RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 TRIM2Q9C040 744 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 SUCOQ9UBS9 1254 aaKnown RBP13.65□□□□□ -0.22
AFF3-201ENST00000317233 CARMIL3Q8ND23 1372 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 STAT4Q14765 748 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 ZNF846Q147U1 533 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 SNRNP48Q6IEG0 339 aaKnown RBP13.65□□□□□ -0.22
AFF3-201ENST00000317233 PLEKHA7Q6IQ23 1121 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 ARHGEF26Q96DR7 871 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 ROGDIQ9GZN7 287 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 MARCOQ9UEW3 520 aaPredicted RBP13.65□□□□□ -0.22
AFF3-201ENST00000317233 MAN1B1Q9UKM7 699 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 NPATQ14207 1427 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 KANSL1LA0AUZ9 987 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 BCLAF3A2AJT9 711 aaKnown RBP13.65□□□□□ -0.22
AFF3-201ENST00000317233 MED26O95402 600 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 ETFBP38117 255 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 TRIP10Q15642 601 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 SAMD3Q8N6K7 520 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 WRNIP1Q96S55 665 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 RANBP17Q9H2T7 1088 aaKnown RBP13.65□□□□□ -0.22
AFF3-201ENST00000317233 UHRF1BP1LA0JNW5 1464 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 LRRC14Q15048 493 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 UBE2SQ16763 222 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 PARD6BQ9BYG5 372 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 RSPH9Q9H1X1 276 aaPredicted RBP13.65□□□□□ -0.22
AFF3-201ENST00000317233 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.65□□□□□ -0.22
AFF3-201ENST00000317233 PSTPIP1O43586 416 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 ZNF177Q13360 481 aaPredicted RBP13.65□□□□□ -0.22
AFF3-201ENST00000317233 TTC39BQ5VTQ0 682 aaPredicted RBP13.65□□□□□ -0.22
AFF3-201ENST00000317233 NEK5Q6P3R8 708 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 UTP15Q8TED0 518 aaKnown RBP13.65□□□□□ -0.22
AFF3-201ENST00000317233 GMCL1Q96IK5 515 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 TMEM237Q96Q45 408 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 ZFYVE9O95405 1425 aa13.65□□□□□ -0.22
AFF3-201ENST00000317233 EEF2KO00418 725 aaKnown RBP13.64□□□□□ -0.23
AFF3-201ENST00000317233 PCSK1P29120 753 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 CASP4P49662 377 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 PDE4DIPQ5VU43 2346 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 EFCAB10A6NFE3 127 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 CD4P01730 458 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 PTPN9P43378 593 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 RAB25P57735 213 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 SGCGQ13326 291 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 ARID5BQ14865 1188 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 CYFIP1Q7L576 1253 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 HPS6Q86YV9 775 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 DGKIO75912 1065 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 CAV3P56539 151 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 SEC16BQ96JE7 1060 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 PIGSQ96S52 555 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 POLR3FQ9H1D9 316 aaPredicted RBP13.64□□□□□ -0.23
AFF3-201ENST00000317233 TRIM17Q9Y577 477 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 HOXB7P09629 217 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 SLC11A2P49281 568 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 COPZ1P61923 177 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 TAF1DQ9H5J8 278 aaPredicted RBP13.64□□□□□ -0.23
AFF3-201ENST00000317233 RHBDL2Q9NX52 303 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 CEP72Q9P209 647 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 NR3C1P04150 777 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 MTTPP55157 894 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 FAM171BQ6P995 826 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 TDRPQ86YL5 185 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 DAW1Q8N136 415 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 USP33Q8TEY7 942 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 CCDC126Q96EE4 140 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 BHLHE41Q9C0J9 482 aaPredicted RBP13.64□□□□□ -0.23
AFF3-201ENST00000317233 ARHGEF10O15013 1369 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 AREL1O15033 823 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 RTN3O95197 1032 aaPredicted RBP13.64□□□□□ -0.23
AFF3-201ENST00000317233 EGFRP00533 1210 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 DLG1Q12959 904 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 KBTBD12Q3ZCT8 623 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 SYDE1Q6ZW31 735 aaPredicted RBP13.64□□□□□ -0.23
AFF3-201ENST00000317233 RHOBTB2Q9BYZ6 727 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 KCNN2Q9H2S1 579 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 TRABDQ9H4I3 376 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 RIMS2Q9UQ26 1411 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 ADGRF5Q8IZF2 1346 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 H3BN98 237 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 MAGEB3O15480 346 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 MTSS1O43312 755 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 ATP5F1P24539 256 aaPredicted RBP13.64□□□□□ -0.23
AFF3-201ENST00000317233 ACTN3Q08043 901 aaPredicted RBP13.64□□□□□ -0.23
AFF3-201ENST00000317233 TRAF2Q12933 501 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 ZNF772Q68DY9 489 aaPredicted RBP13.64□□□□□ -0.23
AFF3-201ENST00000317233 TMEM179Q6ZVK1 233 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 DNAJC10Q8IXB1 793 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 TMEM169Q96HH4 297 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 LRRC4BQ9NT99 713 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 PCMTD2Q9NV79 361 aa13.64□□□□□ -0.23
AFF3-201ENST00000317233 A0A088AWK7 358 aa13.63□□□□□ -0.23
AFF3-201ENST00000317233 VAMP4O75379 141 aa13.63□□□□□ -0.23
AFF3-201ENST00000317233 ZNF10P21506 573 aaPredicted RBP13.63□□□□□ -0.23
AFF3-201ENST00000317233 RXRBP28702 533 aa13.63□□□□□ -0.23
AFF3-201ENST00000317233 PTSQ03393 145 aa13.63□□□□□ -0.23
AFF3-201ENST00000317233 GRB14Q14449 540 aa13.63□□□□□ -0.23
AFF3-201ENST00000317233 CCNG2Q16589 344 aa13.63□□□□□ -0.23
AFF3-201ENST00000317233 CNPY3Q9BT09 278 aa13.63□□□□□ -0.23
AFF3-201ENST00000317233 NRDE2Q9H7Z3 1164 aa13.63□□□□□ -0.23
AFF3-201ENST00000317233 SLC35C2Q9NQQ7 365 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms