RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 USTQ9Y2C2 406 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 FARP1Q9Y4F1 1045 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 hCG_1818297A0A087WSY0 165 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 TRIM49D1C9J1S8 452 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 H0YJX3 145 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 DENRO43583 198 aaKnown RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 FAM189A1O60320 539 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 IDO1P14902 403 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 TM4SF1P30408 202 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 SFNP31947 248 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 FDFT1P37268 417 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 JAK3P52333 1124 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 YWHAEP62258 255 aaKnown RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 NOMO3P69849 1222 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 MAP7D3Q8IWC1 876 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 CTAGE3PQ8IX95 158 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 MCPH1Q8NEM0 835 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 ACTL9Q8TC94 416 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 BTBD6Q96KE9 485 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 MID2Q9UJV3 735 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 AK5Q9Y6K8 562 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 C15orf38-AP3S2A0A0A6YYH1 394 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 BUD23O43709 281 aaKnown RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 CBFA2T3O75081 653 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 ENO1P06733 434 aaKnown RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 GJC1P36383 396 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 AQP5P55064 265 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 KDSRQ06136 332 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 GRAMD1BQ3KR37 738 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 TTC39BQ5VTQ0 682 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 FOXB2Q5VYV0 432 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 PGM2L1Q6PCE3 622 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 CYS1Q717R9 158 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 MON1BQ7L1V2 547 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 ARPINQ7Z6K5 226 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 CBWD2Q8IUF1 395 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 GPD1LQ8N335 351 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF276Q8N554 614 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 PIWIL2Q8TC59 973 aaKnown RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 RSPH1Q8WYR4 309 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 RBM17Q96I25 401 aaKnown RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 MPHOSPH6Q99547 160 aaKnown RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 KCNK13Q9HB14 408 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 SIRPGQ9P1W8 387 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 CHORDC1Q9UHD1 332 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-201ENST00000316707 NR2E3Q9Y5X4 410 aa4.99□□□□□ -1.61
PTPN13-201ENST00000316707 DYTNA2CJ06 578 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 MCF2LO15068 1137 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CFBP00751 764 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CCDC130P13994 396 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ADSLP30566 484 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 GPX6P59796 221 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 LLGL1Q15334 1064 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ANGEL2Q5VTE6 544 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 C4orf19Q8IY42 314 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 KBTBD2Q8IY47 623 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 DAW1Q8N136 415 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 RFWD2Q8NHY2 731 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 SLC26A7Q8TE54 656 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 GDPD5Q8WTR4 605 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 MRRFQ96E11 262 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 LRGUKQ96M69 825 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PWWP2AQ96N64 755 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PREBQ9HCU5 417 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 MRPL40Q9NQ50 206 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 GRID1Q9ULK0 1009 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ARHGAP26Q9UNA1 814 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 FAF1Q9UNN5 650 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CAPN14A8MX76 684 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 APOC4-APOC2K7ER74 178 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 NDUFB10O96000 172 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 LDHAP00338 332 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 APOC2P02655 101 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PYGBP11216 843 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ZFXP17010 805 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 BGNP21810 368 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 NUP107P57740 925 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 USP46P62068 366 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 KRT76Q01546 638 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 TFDP1Q14186 410 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 SLFN12LQ6IEE8 588 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PRPF39Q86UA1 669 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PDSS2Q86YH6 399 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 NTPCRQ9BSD7 190 aaKnown RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CYP26B1Q9NR63 512 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 SLC17A7Q9P2U7 560 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PLLPQ9Y342 182 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 GOLGA8QA0A0J9YX86 632 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 GOLGA8OA6NCC3 632 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 GOLGA8NF8WBI6 632 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 CD58P19256 250 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 TPP2P29144 1249 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 HOXA10P31260 410 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 TTKP33981 857 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 SERPINB6P35237 376 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 RARRES1P49788 294 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 PSMC5P62195 406 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 DMP1Q13316 513 aaPredicted RBP4.98□□□□□ -1.61
PTPN13-201ENST00000316707 ZACNQ401N2 412 aa4.98□□□□□ -1.61
PTPN13-201ENST00000316707 SLC44A4Q53GD3 710 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms