RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 IFNEQ86WN2 208 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 LRRC6Q86X45 466 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 COPS7BQ9H9Q2 264 aaPredicted RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 TLR7Q9NYK1 1049 aaKnown RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 COPG2Q9UBF2 871 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 ZNF862O60290 1169 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 STARD8Q92502 1023 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 POP5Q969H6 163 aaKnown RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 HDHD2Q9H0R4 259 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 UBAP1Q9NZ09 502 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 IQGAP3Q86VI3 1631 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 E9PBE3 544 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 PABPC1P11940 636 aaKnown RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 SWSAP1Q6NVH7 229 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 MRPL39Q9NYK5 338 aaKnown RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 GRK2P25098 689 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 STIP1P31948 543 aaKnown RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 ALDH1A3P47895 512 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 CAMK2GQ13555 558 aaPredicted RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 TIMM50Q3ZCQ8 353 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 ZNF512Q96ME7 567 aaPredicted RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 SLC25A13Q9UJS0 675 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 TMEM114B3SHH9 223 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 F5H423 210 aaPredicted RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 RAD17O75943 681 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 UQCRBP14927 111 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 MYL12AP19105 171 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 SEL1L3Q68CR1 1132 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 MYH1P12882 1939 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 MYH2Q9UKX2 1941 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 MYH4Q9Y623 1939 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 KLHL41O60662 606 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 EZH2Q15910 746 aaKnown RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 ERAP2Q6P179 960 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 CDK20Q8IZL9 346 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 SETD9Q8NE22 299 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 TMEM8AQ9HCN3 771 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 STK39Q9UEW8 545 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 PDGFRAP16234 1089 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 PTGER2P43116 358 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 RPS7P62081 194 aaKnown RBP16.04■□□□□ 0.16
HCFC1-201ENST00000310441 CHI3L2Q15782 390 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 SCUBE1Q8IWY4 988 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 ULK2Q8IYT8 1036 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 ADGRF4Q8IZF3 695 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 ERP44Q9BS26 406 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 CCSER1Q9C0I3 900 aa16.04■□□□□ 0.16
HCFC1-201ENST00000310441 A0A1B0GTH6 734 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 FKBP6O75344 327 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 ETFBP38117 255 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 MAGEA4P43358 317 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 SNRNP35Q16560 246 aaKnown RBP16.03■□□□□ 0.16
HCFC1-201ENST00000310441 LONRF1Q17RB8 773 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 PREPLQ4J6C6 727 aaPredicted RBP16.03■□□□□ 0.16
HCFC1-201ENST00000310441 PLEKHA7Q6IQ23 1121 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 ENKURQ8TC29 256 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 ORAI2Q96SN7 254 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 KLHL28Q9NXS3 571 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 GALNT8Q9NY28 637 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 IGF2BP3O00425 579 aaKnown RBP eCLIP16.03■□□□□ 0.169e-6■■■□□ 17.5
HCFC1-201ENST00000310441 VPS26AO75436 327 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 KRT6AP02538 564 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 MDH1BQ5I0G3 518 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 C7orf25Q9BPX7 421 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 ADI1Q9BV57 179 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 ISCUQ9H1K1 167 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 METP08581 1390 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 CYP2C8P10632 490 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 YWHAZP63104 245 aaKnown RBP16.03■□□□□ 0.16
HCFC1-201ENST00000310441 FAM192AQ9GZU8 254 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 ZNF24P17028 368 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 KIAA0408Q6ZU52 694 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 COL23A1Q86Y22 540 aaPredicted RBP16.03■□□□□ 0.16
HCFC1-201ENST00000310441 APOL5Q9BWW9 433 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 LNPEPQ9UIQ6 1025 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 CRLS1Q9UJA2 301 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 DRG1Q9Y295 367 aaKnown RBP16.03■□□□□ 0.16
HCFC1-201ENST00000310441 MROH7-TTC4A0A0A0MT08 1334 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 GLRA3O75311 464 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 TRIM25Q14258 630 aaKnown RBP16.03■□□□□ 0.16
HCFC1-201ENST00000310441 AAASQ9NRG9 546 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 ATP6V1B1P15313 513 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 GTF2E2P29084 291 aaKnown RBP16.03■□□□□ 0.16
HCFC1-201ENST00000310441 BARGINQ6ZT62 677 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 DYNLL2Q96FJ2 89 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 TMEM47Q9BQJ4 181 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 AHSPQ9NZD4 102 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 VTI1BQ9UEU0 232 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 CLTBP09497 229 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 CRKP46108 304 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 CAAP1Q9H8G2 361 aa16.03■□□□□ 0.16
HCFC1-201ENST00000310441 TBX3O15119 743 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 VPS4BO75351 444 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 KATNA1O75449 491 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 CCNG1P51959 295 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 TFDP3Q5H9I0 405 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 XRRA1Q6P2D8 792 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 BNC2Q6ZN30 1099 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms