RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 TRMT10CQ7L0Y3 403 aaKnown RBP20.43■□□□□ 0.86
HOXC4-201ENST00000303406 DPH6Q7L8W6 267 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 TMEM110Q86TL2 294 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 ARFGAP1Q8N6T3 406 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 TTC13Q8NBP0 860 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 SMG8Q8ND04 991 aaKnown RBP20.43■□□□□ 0.86
HOXC4-201ENST00000303406 UBA3Q8TBC4 463 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 RAPGEF5Q92565 580 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 NKD2Q969F2 451 aaPredicted RBP20.43■□□□□ 0.86
HOXC4-201ENST00000303406 ZBTB9Q96C00 473 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 CNPY3Q9BT09 278 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 TMEM109Q9BVC6 243 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 TRAIPQ9BWF2 469 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 EPB41L4BQ9H329 900 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 HESX1Q9UBX0 185 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 MYADML2A6NDP7 307 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 KPNA7A9QM74 516 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 SEPT4O43236 478 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 CAPN2P17655 700 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 PSMC4P43686 418 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 SOWAHAQ2M3V2 549 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 GNASQ5JWF2 1037 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 GLRA4Q5JXX5 417 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 ZFYVE27Q5T4F4 411 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 PPP1R26Q5T8A7 1209 aaPredicted RBP20.43■□□□□ 0.86
HOXC4-201ENST00000303406 ZNF365Q70YC5 407 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 HOOK3Q86VS8 718 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 ARFGAP2Q8N6H7 521 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 CMASQ8NFW8 434 aaPredicted RBP20.43■□□□□ 0.86
HOXC4-201ENST00000303406 PPP1R13LQ8WUF5 828 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 TRIB2Q92519 343 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 CCDC114Q96M63 670 aa20.43■□□□□ 0.86
HOXC4-201ENST00000303406 LRRD1A4D1F6 860 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 C2CD4BA6NLJ0 364 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 PI4K2BG5E9Z4 385 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 KLRC2P26717 231 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 ACTN2P35609 894 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 RPL34P49207 117 aaKnown RBP20.42■□□□□ 0.86
HOXC4-201ENST00000303406 LLGL1Q15334 1064 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 DENND2CQ68D51 928 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 TXNRD3NBQ6F5E7 133 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 FAM183BPQ6ZVS7 135 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 ACOT1Q86TX2 421 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 HACE1Q8IYU2 909 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 TOP6BLQ8N6T0 577 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 OR6B3Q8NGW1 331 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 SLC35F5Q8WV83 523 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 APOL6Q9BWW8 343 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 NME7Q9Y5B8 376 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 CDY2AQ9Y6F7 541 aa20.42■□□□□ 0.86
HOXC4-201ENST00000303406 A8MXQ7 604 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 E5RJQ4 531 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 TP73O15350 636 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 TRUB2O95900 331 aaKnown RBP20.41■□□□□ 0.86
HOXC4-201ENST00000303406 RARBP10826 455 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 KDELR1P24390 212 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 BYSLQ13895 437 aaKnown RBP20.41■□□□□ 0.86
HOXC4-201ENST00000303406 NBPF20Q3BBV1 942 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 OR6B2Q6IFH4 312 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 LEKR1Q6ZMV7 388 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 BBS12Q6ZW61 710 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 ARCQ7LC44 396 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 TTC30AQ86WT1 665 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 KBTBD7Q8WVZ9 684 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 RNF39Q9H2S5 420 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 KLHL11Q9NVR0 708 aa20.41■□□□□ 0.86
HOXC4-201ENST00000303406 ITGAVP06756 1048 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 KRT10P13645 584 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 WARSP23381 471 aaKnown RBP20.4■□□□□ 0.86
HOXC4-201ENST00000303406 IL1R2P27930 398 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 MIPP30301 263 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 BCAT1P54687 386 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 VCPP55072 806 aaKnown RBP20.4■□□□□ 0.86
HOXC4-201ENST00000303406 OASLQ15646 514 aaKnown RBP20.4■□□□□ 0.86
HOXC4-201ENST00000303406 TWF2Q6IBS0 349 aaKnown RBP20.4■□□□□ 0.86
HOXC4-201ENST00000303406 OLFML1Q6UWY5 402 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 SERINC5Q86VE9 423 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 VSIG1Q86XK7 387 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 RELL1Q8IUW5 271 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 ALLCQ8N6M5 410 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 EMC1Q8N766 993 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 C12orf29Q8N999 325 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 ANKRD52Q8NB46 1076 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 PPP1R10Q96QC0 940 aaKnown RBP20.4■□□□□ 0.86
HOXC4-201ENST00000303406 SLC38A7Q9NVC3 462 aa20.4■□□□□ 0.86
HOXC4-201ENST00000303406 ADAMTS4O75173 837 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 ENDOD1O94919 500 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 DESP17661 470 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 NR1D1P20393 614 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 CST5P28325 142 aaPredicted RBP20.39■□□□□ 0.85
HOXC4-201ENST00000303406 GNL1P36915 607 aaPredicted RBP20.39■□□□□ 0.85
HOXC4-201ENST00000303406 ADCY8P40145 1251 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 FLT3LGP49771 235 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 SLC6A3Q01959 620 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 ADCY2Q08462 1091 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 MGAT3Q09327 533 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 IFFO1Q0D2I5 559 aa20.39■□□□□ 0.85
HOXC4-201ENST00000303406 BST2Q10589 180 aaKnown RBP20.39■□□□□ 0.85
HOXC4-201ENST00000303406 KAZNQ674X7 775 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms