RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ZNF143P52747 638 aaPredicted RBP11.16□□□□□ -0.62
CLP1-201ENST00000302731 SLC25A11Q02978 314 aaKnown RBP11.16□□□□□ -0.62
CLP1-201ENST00000302731 BST2Q10589 180 aaKnown RBP11.16□□□□□ -0.62
CLP1-201ENST00000302731 LPIN1Q14693 890 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 SPDYCQ5MJ68 293 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 FAM102AQ5T9C2 384 aaPredicted RBP11.16□□□□□ -0.62
CLP1-201ENST00000302731 LHX8Q68G74 356 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 TTC27Q6P3X3 843 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 DRICH1Q6PGQ1 229 aaPredicted RBP11.16□□□□□ -0.62
CLP1-201ENST00000302731 AGMOQ6ZNB7 445 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 CCDC105Q8IYK2 499 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 JOSD2Q8TAC2 188 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 FAM71BQ8TC56 605 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 HSFY1Q96LI6 401 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 ZFP42Q96MM3 310 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 SLITRK1Q96PX8 696 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 GAD1Q99259 594 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 CNPY3Q9BT09 278 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 GOLGA2P5Q9HBQ8 144 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 ST7Q9NRC1 585 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 ASNSD1Q9NWL6 643 aa11.16□□□□□ -0.62
CLP1-201ENST00000302731 ARL5CA6NH57 179 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 C2CD4BA6NLJ0 364 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 CYB561D2O14569 222 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 DAPK3O43293 454 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 KRT1P04264 644 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 FAM153BP0C7A2 387 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 GHRP10912 638 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 GPD1P21695 349 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 OAS2P29728 719 aaKnown RBP11.15□□□□□ -0.62
CLP1-201ENST00000302731 LHX1P48742 406 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 FAM193AP78312 1265 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 SLC6A3Q01959 620 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 TRADDQ15628 312 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 FAM153CQ494X1 144 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 ODF2Q5BJF6 829 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 TFDP3Q5H9I0 405 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 DAB2IPQ5VWQ8 1189 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 PMF1Q6P1K2 205 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 FAM183BPQ6ZVS7 135 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 ATL2Q8NHH9 583 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 GDAP1L1Q96MZ0 367 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 HNRNPABQ99729 332 aaKnown RBP11.15□□□□□ -0.62
CLP1-201ENST00000302731 TRIM51Q9BSJ1 452 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 DCLK3Q9C098 648 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 PLEKHA4Q9H4M7 779 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 RSAD1Q9HA92 442 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 TRMT13Q9NUP7 481 aaKnown RBP11.15□□□□□ -0.62
CLP1-201ENST00000302731 FAM49BQ9NUQ9 324 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 RNF19AQ9NV58 838 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 FAM153AQ9UHL3 310 aa11.15□□□□□ -0.62
CLP1-201ENST00000302731 GOLGA6BA6NDN3 693 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 MEIS3P2A8K0S8 358 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 MGEA5O60502 916 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 HSF2BPO75031 334 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 GAS8O95995 478 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 DESP17661 470 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 LMO2P25791 158 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 GRK4P32298 578 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 VEGFBP49765 207 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 LMNB2Q03252 620 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 GABPB1Q06547 395 aaPredicted RBP11.14□□□□□ -0.63
CLP1-201ENST00000302731 PDE4CQ08493 712 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 GRIK3Q13003 919 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 MTMR3Q13615 1198 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 TAZQ16635 292 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 OR6B2Q6IFH4 312 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 OLFML1Q6UWY5 402 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 MFSD7Q6UXD7 560 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 SPOCD1Q6ZMY3 1216 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 IQCKQ8N0W5 287 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 ARFGAP1Q8N6T3 406 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 B3GALNT2Q8NCR0 500 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 UROC1Q96N76 676 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 HERPUD2Q9BSE4 406 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 FRMD8P1Q9BZ68 369 aaPredicted RBP11.14□□□□□ -0.63
CLP1-201ENST00000302731 DPEP3Q9H4B8 488 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 ZDHHC18Q9NUE0 388 aa11.14□□□□□ -0.63
CLP1-201ENST00000302731 hCG_1818297A0A087WSY0 165 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 A0A1W2PQ45 241 aaPredicted RBP11.13□□□□□ -0.63
CLP1-201ENST00000302731 A0A1W2PQY0 241 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 H3BQF6 201 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 AGPSO00116 658 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 XPO1O14980 1071 aaKnown RBP11.13□□□□□ -0.63
CLP1-201ENST00000302731 PDGFRBP09619 1106 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 CKBP12277 381 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 TCF4P15884 667 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 CDKN2BP42772 138 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 SLC8A3P57103 927 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 UPP1Q16831 310 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 ATP13A4Q4VNC1 1196 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 ZNF618Q5T7W0 954 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 TRAF7Q6Q0C0 670 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 SLC26A9Q7LBE3 791 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 ZNF598Q86UK7 904 aaKnown RBP11.13□□□□□ -0.63
CLP1-201ENST00000302731 OSTM1Q86WC4 334 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 VSIG1Q86XK7 387 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 DDX42Q86XP3 938 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLP1-201ENST00000302731 EMC1Q8N766 993 aa11.13□□□□□ -0.63
CLP1-201ENST00000302731 TSEN2Q8NCE0 465 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms