RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 GRAMD1BQ3KR37 738 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 TMCO4Q5TGY1 634 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 SPOPLQ6IQ16 392 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 SPOCD1Q6ZMY3 1216 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 RNF111Q6ZNA4 994 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 RBM44Q6ZP01 1051 aaKnown RBP13.62□□□□□ -0.23
TVP23A-201ENST00000299866 CPT1BQ92523 772 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 AGBL1Q96MI9 1066 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 PLEKHG4BQ96PX9 1271 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 KLHL4Q9C0H6 718 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.62□□□□□ -0.23
TVP23A-201ENST00000299866 CYB561D2O14569 222 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 FKBP6O75344 327 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 DHRS4L1P0CG22 281 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 CHI3L2Q15782 390 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 RALGPS1Q5JS13 557 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 CHSY1Q86X52 802 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 SNRNP27Q8WVK2 155 aaKnown RBP13.62□□□□□ -0.23
TVP23A-201ENST00000299866 CYP4F11Q9HBI6 524 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 MRPL47Q9HD33 250 aaKnown RBP13.62□□□□□ -0.23
TVP23A-201ENST00000299866 C1orf112Q9NSG2 853 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 KCNK4Q9NYG8 393 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 PCDHB2Q9Y5E7 798 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 F8VP50 259 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 NRLP54845 237 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 ZYXQ15942 572 aaKnown RBP13.62□□□□□ -0.23
TVP23A-201ENST00000299866 KBTBD12Q3ZCT8 623 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 CEP55Q53EZ4 464 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 CDC42EP5Q6NZY7 148 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 MIER3Q7Z3K6 550 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 SIAH1Q8IUQ4 282 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 IGDCC3Q8IVU1 814 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 PPIL6Q8IXY8 311 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 CCDC17Q96LX7 622 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 SRPK1Q96SB4 655 aaKnown RBP13.62□□□□□ -0.23
TVP23A-201ENST00000299866 DHRS4Q9BTZ2 278 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 PCDH9Q9HC56 1237 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 GPAMQ9HCL2 828 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 POLLQ9UGP5 575 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 XPO7Q9UIA9 1087 aaKnown RBP13.62□□□□□ -0.23
TVP23A-201ENST00000299866 TBC1D30Q9Y2I9 924 aa13.62□□□□□ -0.23
TVP23A-201ENST00000299866 IPO5O00410 1097 aaKnown RBP13.61□□□□□ -0.23
TVP23A-201ENST00000299866 ATP2B4P23634 1241 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 BASP1P80723 227 aaKnown RBP13.61□□□□□ -0.23
TVP23A-201ENST00000299866 TMED1Q13445 227 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 OASLQ15646 514 aaKnown RBP13.61□□□□□ -0.23
TVP23A-201ENST00000299866 EFHC1Q5JVL4 640 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 FAM102BQ5T8I3 360 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 CIAPIN1Q6FI81 312 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 C12orf56Q8IXR9 622 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 RBM12BQ8IXT5 1001 aaKnown RBP13.61□□□□□ -0.23
TVP23A-201ENST00000299866 GCNAQ96QF7 691 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 EBF4Q9BQW3 602 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 WDR11Q9BZH6 1224 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 WWP1Q9H0M0 922 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 PICK1Q9NRD5 415 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 A0A088AWK7 358 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 ATP6V1G1O75348 118 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 TMCC1O94876 653 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 DESP17661 470 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 PSMC5P62195 406 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 IRX4P78413 519 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 HNRNPDQ14103 355 aaKnown RBP13.61□□□□□ -0.23
TVP23A-201ENST00000299866 PDIK1LQ8N165 341 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 FEZF2Q8TBJ5 459 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 E2F7Q96AV8 911 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 ZNF335Q9H4Z2 1342 aaPredicted RBP13.61□□□□□ -0.23
TVP23A-201ENST00000299866 STRCP1A6NGW2 1772 aa13.61□□□□□ -0.23
TVP23A-201ENST00000299866 TRIM49D1C9J1S8 452 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 TMEM63AO94886 807 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 ATP6V1B1P15313 513 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 ELK3P41970 407 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 SH2D4BQ5SQS7 431 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 ZCCHC23Q6ZST2 131 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 RSAD2Q8WXG1 361 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 AGTPBP1Q9UPW5 1226 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 DRG1Q9Y295 367 aaKnown RBP13.6□□□□□ -0.23
TVP23A-201ENST00000299866 COQ4Q9Y3A0 265 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 SNCAIPQ9Y6H5 919 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 KAT6AQ92794 2004 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 SMIM31A0A1B0GVY4 71 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 RPL22P35268 128 aaKnown RBP13.6□□□□□ -0.23
TVP23A-201ENST00000299866 CHN2P52757 468 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 ZNF200P98182 395 aaPredicted RBP13.6□□□□□ -0.23
TVP23A-201ENST00000299866 RABGAP1LQ5R372 815 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 CES4AQ5XG92 561 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 DPY19L2Q6NUT2 758 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 TMEM270Q6UE05 265 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 PPM1NQ8N819 430 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 DGCR14Q96DF8 476 aaKnown RBP13.6□□□□□ -0.23
TVP23A-201ENST00000299866 SENP7Q9BQF6 1050 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 NYAP2Q9P242 653 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 DNAJB4Q9UDY4 337 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
TVP23A-201ENST00000299866 STIP1P31948 543 aaKnown RBP13.6□□□□□ -0.23
TVP23A-201ENST00000299866 HSPA2P54652 639 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 BTKQ06187 659 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 FBXL19Q6PCT2 694 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 AMIGO3Q86WK7 504 aa13.6□□□□□ -0.23
TVP23A-201ENST00000299866 CEP70Q8NHQ1 597 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms