RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TNFRSF8P28908 595 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 EFNA5P52803 228 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 CACNA2D1P54289 1103 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 PTK7Q13308 1070 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 PIGHQ14442 188 aaPredicted RBP13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 TAF12Q16514 161 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 BTNL9Q6UXG8 535 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 PDZD4Q76G19 769 aaPredicted RBP13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 SIX6OS1Q8N1H7 587 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 ADNPQ9H2P0 1102 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 CISHQ9NSE2 258 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 NINJ2Q9NZG7 142 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 KLHL8Q9P2G9 620 aaPredicted RBP13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 WRAP73Q9P2S5 460 aaPredicted RBP13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 ZC3H7BQ9UGR2 993 aaKnown RBP13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 PARP4Q9UKK3 1724 aaKnown RBP13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 PYGBP11216 843 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 CENPCQ03188 943 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 KPNB1Q14974 876 aaKnown RBP13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 ATF7IP2Q5U623 682 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 IYDQ6PHW0 289 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 CCDC60Q8IWA6 550 aaPredicted RBP13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 FAM111AQ96PZ2 611 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 ETAA1Q9NY74 926 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 WHRNQ9P202 907 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 SPDYE16A6NNV3 312 aaPredicted RBP13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 HNRNPCL1O60812 293 aaKnown RBP13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 PECAM1P16284 738 aaPredicted RBP13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 SOX11P35716 441 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 PSMD7P51665 324 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 TATDN1Q6P1N9 297 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 GPRASP2Q96D09 838 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 PCMTD2Q9NV79 361 aa13.08□□□□□ -0.32
SLC6A1-201ENST00000287766 IGKV6D-41A0A0C4DH26 115 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 TULP2O00295 520 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 BANF1O75531 89 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 AUHQ13825 339 aaKnown RBP13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 SLC15A2Q16348 729 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 GLRA4Q5JXX5 417 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 FAM182AQ5T1J6 154 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 HEATR6Q6AI08 1181 aaKnown RBP13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 EFCAB12Q6NXP0 572 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 C4orf50Q6ZRC1 276 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 ABRAQ8N0Z2 381 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 FBXO36Q8NEA4 188 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 AIM2O14862 343 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 SLC4A1P02730 911 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 BACE1P56817 501 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 JAG1P78504 1218 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 MROH9Q5TGP6 573 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 TMEM161BQ8NDZ6 487 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 PRCCQ92733 491 aaPredicted RBP13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 OPTNQ96CV9 577 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 TMEM237Q96Q45 408 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 DDX18Q9NVP1 670 aaKnown RBP13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 RGL2O15211 777 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 SUPT20HL2P0C7V6 817 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 FAM200BP0CF97 657 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 PKN2Q16513 984 aaKnown RBP13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 BMT2Q1RMZ1 405 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 LRRC8EQ6NSJ5 796 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 KDELC2Q7Z4H8 507 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 CD302Q8IX05 232 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 DCLRE1BQ9H816 532 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 SIX2Q9NPC8 291 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 GIMAP4Q9NUV9 329 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 SENP1Q9P0U3 644 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 VWA5AO00534 786 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 NEMP1O14524 444 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 PEX10O60683 326 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 FDX1P10109 184 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 MUTP22033 750 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 GARTP22102 1010 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 IREB2P48200 963 aaKnown RBP13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 TRIM16LQ309B1 348 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 RWDD4Q6NW29 188 aaKnown RBP13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 FAM71AQ8IYT1 594 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 LRRN4Q8WUT4 740 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 C2orf40Q9H1Z8 148 aa13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 SMG5Q9UPR3 1016 aaKnown RBP13.07□□□□□ -0.32
SLC6A1-201ENST00000287766 M0QZ92 97 aa13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 DDX3YO15523 660 aaKnown RBP13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 HDAC4P56524 1084 aa13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 RPL7AP62424 266 aaKnown RBP13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 DNAL1Q4LDG9 190 aa13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 RAB44Q7Z6P3 723 aaPredicted RBP13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 ZNF677Q86XU0 584 aa13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 SKA2Q8WVK7 121 aaPredicted RBP13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 NSL1Q96IY1 281 aa13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 COL20A1Q9P218 1284 aa13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 MID2Q9UJV3 735 aa13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 PCDHA2Q9Y5H9 948 aa13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 IGLV3-22A0A075B6J6 115 aa13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 DEAF1O75398 565 aaPredicted RBP13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 OSBPP22059 807 aa13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 TYK2P29597 1187 aa13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 ZNF200P98182 395 aaPredicted RBP13.06□□□□□ -0.32
SLC6A1-201ENST00000287766 TTC27Q6P3X3 843 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms