RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 NDUFV1P49821 464 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 ATXN1P54253 815 aaKnown RBP11.57□□□□□ -0.56
GGPS1-201ENST00000282841 CACNA2D1P54289 1103 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 RWDD2BP57060 319 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 LCLAT1Q6UWP7 414 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 ECHDC2Q86YB7 292 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 CFAP57Q96MR6 1250 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 KCNK16Q96T55 309 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 C10orf88Q9H8K7 445 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 ARFGAP3Q9NP61 516 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 CHST12Q9NRB3 414 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 TMEM30AQ9NV96 361 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 ARGLU1Q9NWB6 273 aaPredicted RBP11.57□□□□□ -0.56
GGPS1-201ENST00000282841 R3HDM2Q9Y2K5 976 aaKnown RBP11.57□□□□□ -0.56
GGPS1-201ENST00000282841 CEP290O15078 2479 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 SYNJ2BP-COX16A0A087WUM0 186 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 NT5C1B-RDH14C9J2C7 533 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 UPP2O95045 317 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 FAM153BP0C7A2 387 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 RARAP10276 462 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 RALAP11233 206 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 IL1R2P27930 398 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 CYP2C18P33260 490 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 DYNLT1P63172 113 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 POU5F1Q01860 360 aaKnown RBP11.57□□□□□ -0.56
GGPS1-201ENST00000282841 TRIP13Q15645 432 aaPredicted RBP11.57□□□□□ -0.56
GGPS1-201ENST00000282841 FAM153CQ494X1 144 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 SV2CQ496J9 727 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 CLLU1OSQ5K130 101 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 TTC27Q6P3X3 843 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 LRRC8DQ7L1W4 858 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 RASGEF1CQ8N431 466 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 TRIM11Q96F44 468 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
GGPS1-201ENST00000282841 ZNF560Q96MR9 790 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 WNT8AQ9H1J5 351 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 CARD9Q9H257 536 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 COX16Q9P0S2 106 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 FAM153AQ9UHL3 310 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 TMEM59LQ9UK28 342 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 TTC3P53804 2025 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 CD48P09326 243 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 OR4Q2P0C623 313 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 CDH5P33151 784 aaPredicted RBP11.57□□□□□ -0.56
GGPS1-201ENST00000282841 UPP1Q16831 310 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 PPP1R15BQ5SWA1 713 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 BEND6Q5SZJ8 279 aaPredicted RBP11.57□□□□□ -0.56
GGPS1-201ENST00000282841 PRELID2Q8N945 189 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 C3orf20Q8ND61 904 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 LRRN4Q8WUT4 740 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 CASKIN2Q8WXE0 1202 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 RAPGEF5Q92565 580 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 MED10Q9BTT4 135 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 LHX5Q9H2C1 402 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 STIM2Q9P246 746 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 SCINQ9Y6U3 715 aa11.57□□□□□ -0.56
GGPS1-201ENST00000282841 ATP8B3O60423 1300 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 XPOTO43592 962 aaKnown RBP11.56□□□□□ -0.56
GGPS1-201ENST00000282841 GNRH1P01148 92 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 MAP3K7CLP57077 242 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 SMC1AQ14683 1233 aaKnown RBP11.56□□□□□ -0.56
GGPS1-201ENST00000282841 SEL1L2Q5TEA6 688 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 FAM117BQ6P1L5 589 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 ZNF572Q7Z3I7 529 aaPredicted RBP11.56□□□□□ -0.56
GGPS1-201ENST00000282841 RPAINQ86UA6 219 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 FAM126BQ8IXS8 530 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 B3GALNT2Q8NCR0 500 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 RPGRIP1Q96KN7 1286 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 CRTAC1Q9NQ79 661 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 CHST7Q9NS84 486 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 HESX1Q9UBX0 185 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 RAB21Q9UL25 225 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 SCN5AQ14524 2016 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 MIF4GDA9UHW6 222 aaKnown RBP11.56□□□□□ -0.56
GGPS1-201ENST00000282841 PAPSS1O43252 624 aaPredicted RBP11.56□□□□□ -0.56
GGPS1-201ENST00000282841 STAU1O95793 577 aaKnown RBP11.56□□□□□ -0.56
GGPS1-201ENST00000282841 VPS41P49754 854 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 IFRD2Q12894 506 aaPredicted RBP11.56□□□□□ -0.56
GGPS1-201ENST00000282841 TCEAL1Q15170 157 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 SCYL2Q6P3W7 929 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 CCNI2Q6ZMN8 369 aaPredicted RBP11.56□□□□□ -0.56
GGPS1-201ENST00000282841 SLC13A5Q86YT5 568 aaPredicted RBP11.56□□□□□ -0.56
GGPS1-201ENST00000282841 FUKQ8N0W3 1084 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.56□□□□□ -0.56
GGPS1-201ENST00000282841 HSPH1Q92598 858 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 MAGOHBQ96A72 148 aaKnown RBP11.56□□□□□ -0.56
GGPS1-201ENST00000282841 VCPIP1Q96JH7 1222 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 ADAM33Q9BZ11 813 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 GPATCH2LQ9NWQ4 482 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 GDAP2Q9NXN4 497 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 PHF24Q9UPV7 400 aa11.56□□□□□ -0.56
GGPS1-201ENST00000282841 PDCD11Q14690 1871 aaKnown RBP11.55□□□□□ -0.56
GGPS1-201ENST00000282841 DAPK3O43293 454 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 LRCH4O75427 683 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 MAP3K6O95382 1288 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 PTPN1P18031 435 aaKnown RBP11.55□□□□□ -0.56
GGPS1-201ENST00000282841 OR1G1P47890 313 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 PPARDQ03181 441 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 RNASELQ05823 741 aaKnown RBP11.55□□□□□ -0.56
GGPS1-201ENST00000282841 MFSD7Q6UXD7 560 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms