RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PRRG1O14668 218 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 ASMTLO95671 621 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 CNTFP26441 200 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 NUP107P57740 925 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 ADCK2Q7Z695 626 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 HS6ST3Q8IZP7 471 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 IPMKQ8NFU5 416 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 IL1RL2Q9HB29 575 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 ERAP1Q9NZ08 941 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 C19orf81C9J6K1 198 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 CST8O60676 142 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 FAM200BP0CF97 657 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 ANXA11P50995 505 aaKnown RBP18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 KDM7AQ6ZMT4 941 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 GRAP2O75791 330 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 FAM71DQ8N9W8 422 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 SLC40A1Q9NP59 571 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 PRMT7Q9NVM4 692 aaPredicted RBP18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 RPA1P27694 616 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 PEX5P50542 639 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 MROH9Q5TGP6 573 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 NLRP9Q7RTR0 991 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 CELF4Q9BZC1 486 aaKnown RBP18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 TUBE1Q9UJT0 475 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 PREX1Q8TCU6 1659 aa18.13■□□□□ 0.49
NOTCH3-201ENST00000263388 STOX1Q6ZVD7 989 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 SUGP1Q8IWZ8 645 aaKnown RBP18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 NIF3L1Q9GZT8 377 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 FHOD1Q9Y613 1164 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 C2orf81A6NN90 581 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 NCAM1P13591 858 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 RGS2P41220 211 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 PNPLA4P41247 253 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 PTGISQ16647 500 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 RABL6Q3YEC7 729 aaPredicted RBP18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 DEPDC7Q96QD5 511 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 MAGEA13PA6NCF6 341 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 RBP3P10745 1247 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 ARMCX4Q5H9R4 360 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 MICU2Q8IYU8 434 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 PPP2R3CQ969Q6 453 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 SNAP23O00161 211 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 POLRMTO00411 1230 aaKnown RBP18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 TIMM44O43615 452 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 CCDC60Q8IWA6 550 aaPredicted RBP18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 ACAD10Q6JQN1 1059 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 DDHD1Q8NEL9 900 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 DPF2Q92785 391 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 APBB2Q92870 758 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 ANKRD27Q96NW4 1050 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 SOAT1P35610 550 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 STK4Q13043 487 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 NCF4Q15080 339 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 MTERF3Q96E29 417 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 PRKCEQ02156 737 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 HOMEZQ8IX15 550 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 ZNF333Q96JL9 665 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 COQ7Q99807 217 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 SLC39A10Q9ULF5 831 aa18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.12■□□□□ 0.49
NOTCH3-201ENST00000263388 LOC102724159A0A0B4J2E5 919 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 DNAJC3Q13217 504 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 PWP2Q15269 919 aaKnown RBP18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 ZCWPW2Q504Y3 356 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 CCNJLQ8IV13 435 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 GOLGA7BQ2TAP0 167 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 NOD2Q9HC29 1040 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 PRDM5Q9NQX1 630 aaPredicted RBP18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 MBD2Q9UBB5 411 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 TM9SF1O15321 606 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 HLA-DRAP01903 254 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 CRYMQ14894 314 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 DCLRE1BQ9H816 532 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 WDR93Q6P2C0 686 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 ASZ1Q8WWH4 475 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 AAR2Q9Y312 384 aaKnown RBP18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 CALB2P22676 271 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 SLITRK1Q96PX8 696 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 TRIM66O15016 1216 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 PKN2Q16513 984 aaKnown RBP18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 EFCAB1Q9HAE3 211 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 SPASTQ9UBP0 616 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 TRMT6Q9UJA5 497 aaKnown RBP18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 SH3BP1Q9Y3L3 701 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 ATP6V1B1P15313 513 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 GTF2H1P32780 548 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 MRPL48Q96GC5 212 aaKnown RBP18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 ANKEF1Q9NU02 776 aa18.11■□□□□ 0.49
NOTCH3-201ENST00000263388 XPO1O14980 1071 aaKnown RBP18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 RGS5O15539 181 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 NKX1-1Q15270 411 aaPredicted RBP18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 UBE2OQ9C0C9 1292 aaKnown RBP18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 FANCEQ9HB96 536 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 PRKCQQ04759 706 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 HIC2Q96JB3 615 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 ADAM30Q9UKF2 790 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 RNF112Q9ULX5 631 aa18.1■□□□□ 0.49
NOTCH3-201ENST00000263388 TBX20Q9UMR3 447 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms