RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 MED7O43513 233 aa29.09■■■□□ 2.25
SMARCD3-201ENST00000262188 OR1D2P34982 312 aa29.09■■■□□ 2.25
SMARCD3-201ENST00000262188 CYLC1P35663 651 aaPredicted RBP29.09■■■□□ 2.25
SMARCD3-201ENST00000262188 ERVK-21P61565 698 aa29.09■■■□□ 2.25
SMARCD3-201ENST00000262188 CCDC122Q5T0U0 273 aa29.09■■■□□ 2.25
SMARCD3-201ENST00000262188 ARHGAP17Q68EM7 881 aa29.09■■■□□ 2.25
SMARCD3-201ENST00000262188 TTC9BQ8N6N2 239 aa29.09■■■□□ 2.25
SMARCD3-201ENST00000262188 PLVAPQ9BX97 442 aa29.09■■■□□ 2.25
SMARCD3-201ENST00000262188 PCDHGC3Q9UN70 934 aa29.09■■■□□ 2.25
SMARCD3-201ENST00000262188 CEP83Q9Y592 693 aa29.09■■■□□ 2.25
SMARCD3-201ENST00000262188 EPOPA6NHQ4 379 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 C5orf67F2Z3F1 127 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 H7C4K7 107 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 PIK3R2O00459 728 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 GPS2Q13227 327 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 CAMK1Q14012 370 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 PTPN14Q15678 1187 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 CLEC16AQ2KHT3 1053 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 ALKBH5Q6P6C2 394 aaKnown RBP29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 RNF19BQ6ZMZ0 732 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 TMC7Q7Z402 723 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 FAM35AQ86V20 835 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 VPS36Q86VN1 386 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 TCF25Q9BQ70 676 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 KRT82Q9NSB4 513 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 ABI2Q9NYB9 513 aaPredicted RBP29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 TJP2Q9UDY2 1190 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 NENFQ9UMX5 172 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 RWDD3Q9Y3V2 267 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 MYO7AQ13402 2215 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 NRDCO43847 1150 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 CYP1A1P04798 512 aaPredicted RBP29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 BDNFP23560 247 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 IRS1P35568 1242 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 NOMO3P69849 1222 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 RAB30Q15771 203 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 PLPP4Q5VZY2 271 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 PHLDB2Q86SQ0 1253 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 ATAD1Q8NBU5 361 aa29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 HNRNPABQ99729 332 aaKnown RBP29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 MRPL17Q9NRX2 175 aaKnown RBP29.08■■■□□ 2.25
SMARCD3-201ENST00000262188 EIF3CLB5ME19 914 aaKnown RBP29.07■■■□□ 2.24
SMARCD3-201ENST00000262188 VNN2O95498 520 aa29.07■■■□□ 2.24
SMARCD3-201ENST00000262188 CTSAP10619 480 aa29.07■■■□□ 2.24
SMARCD3-201ENST00000262188 UNGP13051 313 aaPredicted RBP29.07■■■□□ 2.24
SMARCD3-201ENST00000262188 TNNT1P13805 278 aa29.07■■■□□ 2.24
SMARCD3-201ENST00000262188 EIF3CQ99613 913 aaKnown RBP29.07■■■□□ 2.24
SMARCD3-201ENST00000262188 SLC28A3Q9HAS3 691 aa29.07■■■□□ 2.24
SMARCD3-201ENST00000262188 ENTPD7Q9NQZ7 604 aa29.07■■■□□ 2.24
SMARCD3-201ENST00000262188 CHORDC1Q9UHD1 332 aaPredicted RBP29.07■■■□□ 2.24
SMARCD3-201ENST00000262188 WDR27A2RRH5 827 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 CARNS1A5YM72 827 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 OR6C75A6NL08 312 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 HIDE1A8MVS5 230 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 RFXAPO00287 272 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 CYP2F1P24903 491 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 RGS7P49802 495 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 ROR1Q01973 937 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 PKDCCQ504Y2 493 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 LLGL2Q6P1M3 1020 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 KCNK16Q96T55 309 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 CRISPLD1Q9H336 500 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 COLQQ9Y215 455 aaPredicted RBP29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 ADGRG1Q9Y653 693 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 RCCD1A6NED2 376 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 KIF1CO43896 1103 aaKnown RBP29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 LILRB3O75022 631 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 SOAT2O75908 522 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 CXCL14O95715 111 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 GPD2P43304 727 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 GPM6BQ13491 265 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 GDPD5Q8WTR4 605 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 C11orf84Q9BUA3 381 aaPredicted RBP29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 HESX1Q9UBX0 185 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 MYH10P35580 1976 aa29.06■■■□□ 2.24
SMARCD3-201ENST00000262188 SPATA2LQ8IUW3 424 aaPredicted RBP29.05■■■□□ 2.24
SMARCD3-201ENST00000262188 DCP1BQ8IZD4 617 aaKnown RBP29.05■■■□□ 2.24
SMARCD3-201ENST00000262188 STKLD1Q8NE28 680 aa29.05■■■□□ 2.24
SMARCD3-201ENST00000262188 SLC27A5Q9Y2P5 690 aa29.05■■■□□ 2.24
SMARCD3-201ENST00000262188 BACE2Q9Y5Z0 518 aa29.05■■■□□ 2.24
SMARCD3-201ENST00000262188 TEX28O15482 410 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 AP1G2O75843 785 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 LCA5LO95447 670 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 ABL1P00519 1130 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 FTLP02792 175 aaPredicted RBP29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 ABCB4P21439 1286 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 MAP3K7CLP57077 242 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 SLC8B1Q6J4K2 584 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 ANKRD52Q8NB46 1076 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 SMOQ99835 787 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 PCDHA13Q9Y5I0 950 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 USP27XA6NNY8 438 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 CNPP09543 421 aaKnown RBP29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 GPR15P49685 360 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 SPA17Q15506 151 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 PMF1Q6P1K2 205 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 CLEC20AQ6ZU45 233 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 MICAL1Q8TDZ2 1067 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 TIFAQ96CG3 184 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms