RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 FAM35AQ86V20 835 aa19.9■□□□□ 0.78
CYSTM1-201ENST00000261811 SLC2A14Q8TDB8 520 aa19.9■□□□□ 0.78
CYSTM1-201ENST00000261811 GIPC2Q8TF65 315 aa19.9■□□□□ 0.78
CYSTM1-201ENST00000261811 HNRNPABQ99729 332 aaKnown RBP19.9■□□□□ 0.78
CYSTM1-201ENST00000261811 TSPY26PQ9H489 355 aa19.9■□□□□ 0.78
CYSTM1-201ENST00000261811 DMAP1Q9NPF5 467 aaPredicted RBP19.9■□□□□ 0.78
CYSTM1-201ENST00000261811 FAM49BQ9NUQ9 324 aa19.9■□□□□ 0.78
CYSTM1-201ENST00000261811 MYO16Q9Y6X6 1858 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 PAEPP09466 180 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 FAM200BP0CF97 657 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 CDC25CP30307 473 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 RAD23BP54727 409 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 EPHA5P54756 1037 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 DDR2Q16832 855 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 ARHGAP15Q53QZ3 475 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 LRSAM1Q6UWE0 723 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 ARHGEF19Q8IW93 802 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 C12orf29Q8N999 325 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 SLC4A11Q8NBS3 891 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 WHAMMQ8TF30 809 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 PCMTD1Q96MG8 357 aaPredicted RBP19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 TWNKQ96RR1 684 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 LPIN3Q9BQK8 851 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 ZNF518BQ9C0D4 1074 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 GPR88Q9GZN0 384 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 CBX8Q9HC52 389 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 ZMYM5Q9UJ78 669 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 DAAM1Q9Y4D1 1078 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 C5orf42Q9H799 3197 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 NCOR1O75376 2440 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 ANAPC1Q9H1A4 1944 aa19.89■□□□□ 0.77
CYSTM1-201ENST00000261811 AP1G2O75843 785 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 VDRP11473 427 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 KRT5P13647 590 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 CCDC130P13994 396 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 CD19P15391 556 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 ADORA2BP29275 332 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 NTHL1P78549 312 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 UBXN1Q04323 297 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 IQCB1Q15051 598 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 STILQ15468 1287 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 CCDC142Q17RM4 750 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 DENND5BQ6ZUT9 1274 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 ZDHHC14Q8IZN3 488 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 FUKQ8N0W3 1084 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 TRMT2BQ96GJ1 504 aaKnown RBP19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 KRT82Q9NSB4 513 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 HESX1Q9UBX0 185 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 CDH7Q9ULB5 785 aa19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 MAGED2Q9UNF1 606 aaPredicted RBP19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 NUP210Q8TEM1 1887 aaPredicted RBP19.88■□□□□ 0.77
CYSTM1-201ENST00000261811 SLC38A8A6NNN8 435 aa19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 LGALS16A8MUM7 142 aa19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 LOC730098B7Z3J9 87 aa19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 F8VP50 259 aa19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 CLDN5O00501 218 aa19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 RTN3O95197 1032 aaPredicted RBP19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 SERPINC1P01008 464 aa19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 SP100P23497 879 aaPredicted RBP19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 ARHGAP44Q17R89 818 aa19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 GJD3Q8N144 294 aa19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 GPR152Q8TDT2 470 aa19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 GDE1Q9NZC3 331 aa19.87■□□□□ 0.77
CYSTM1-201ENST00000261811 C19orf67A6NJJ6 358 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 NOL4O94818 638 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 GABRR2P28476 465 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 GPR15P49685 360 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 PPP1R26Q5T8A7 1209 aaPredicted RBP19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 ARHGAP17Q68EM7 881 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 HS6ST3Q8IZP7 471 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 NUP93Q8N1F7 819 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 UBR7Q8N806 425 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 RBBP8NLQ8NC74 664 aaPredicted RBP19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 FGF13Q92913 245 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 MYRFLQ96LU7 910 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 ANP32EQ9BTT0 268 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 LSM14BQ9BX40 385 aaKnown RBP19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 ATXN3LQ9H3M9 355 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 PLCB1Q9NQ66 1216 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 COMMD8Q9NX08 183 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 DNAJC12Q9UKB3 198 aa19.86■□□□□ 0.77
CYSTM1-201ENST00000261811 C2CD4DB7Z1M9 353 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 MED7O43513 233 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 LAMP2P13473 410 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 ATP1A3P13637 1013 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 ACO1P21399 889 aaKnown RBP19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 USP8P40818 1118 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 PPP3CCP48454 512 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 MAP3K7CLP57077 242 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 PRSS36Q5K4E3 855 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 SDHAF4Q5VUM1 108 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 PAQR9Q6ZVX9 377 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 MTSS1LQ765P7 747 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 LUZP1Q86V48 1076 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 NEK11Q8NG66 645 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 ITFG1Q8TB96 612 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 FEZF2Q8TBJ5 459 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 MRPS31Q92665 395 aaKnown RBP19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 KAT5Q92993 513 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 NXPE3Q969Y0 559 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms