RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 FSCN2O14926 492 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 EXTL3O43909 919 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 ZEB2O60315 1214 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 ABLIM3O94929 683 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 CCL5P13501 91 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 CCDC130P13994 396 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 XBP1P17861 261 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 KRT9P35527 623 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 OSTNP61366 133 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 ZBED6P86452 979 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 PTCD2Q8WV60 388 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.04□□□□□ -1.447e-8■■□□□ 11.9
TOPBP1-201ENST00000260810 GPBP1L1Q9HC44 474 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 BRMS1Q9HCU9 246 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 INTS6Q9UL03 887 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 ERICH2A1L162 156 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 ZNF233A6NK53 670 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 TMEM63AO94886 807 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 GCNT3O95395 438 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 SHBGP04278 402 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 BRD2P25440 801 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 CHKAP35790 457 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 CDKN2BP42772 138 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 RGRP47804 291 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 GPX6P59796 221 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 POLR2FP61218 127 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 COL9A2Q14055 689 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 PAN2Q504Q3 1202 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 FSCBQ5H9T9 825 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 AUTS2Q8WXX7 1259 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 GAD1Q99259 594 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 GBP3Q9H0R5 595 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 GCNT4Q9P109 453 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 NCOR2Q9Y618 2525 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 NT5C1B-RDH14C9J2C7 533 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 PIK3R2O00459 728 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 ZMYND10O75800 440 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 RGS19P49795 217 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 LLGL1Q15334 1064 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 USP38Q8NB14 1042 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 U2AF1L4Q8WU68 220 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 PRR11Q96HE9 360 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 CGRRF1Q99675 332 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 FAM105AQ9NUU6 356 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 TBC1D13Q9NVG8 400 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 TMOD4Q9NZQ9 345 aa6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 SEC63Q9UGP8 760 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 TNRC6AQ8NDV7 1962 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 COL5A1P20908 1838 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-201ENST00000260810 KLHL18O94889 574 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 PRLP01236 227 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 ACAT1P24752 427 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 TRIM29Q14134 588 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 CLEC16AQ2KHT3 1053 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 FKBP15Q5T1M5 1219 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 FOXR1Q6PIV2 292 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 PCDH19Q8TAB3 1148 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC35G2Q8TBE7 412 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 GPR152Q8TDT2 470 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 AENQ8WTP8 325 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 GLG1Q92896 1179 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 LRRC1Q9BTT6 524 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 STK33Q9BYT3 514 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 ERAP1Q9NZ08 941 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 DNAJC12Q9UKB3 198 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 SSU72P8A0A1W2PR75 194 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 RFXAPO00287 272 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 RARAP10276 462 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 TNNT1P13805 278 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 TRIM21P19474 475 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 MGAT5Q09328 741 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 ZC3H12AQ5D1E8 599 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 PRSS36Q5K4E3 855 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 MPZL3Q6UWV2 235 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 CAND1Q86VP6 1230 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 FEZ1Q99689 392 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 TMEM8AQ9HCN3 771 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 EXOC1Q9NV70 894 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 AURKAO14965 403 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 KIAA0355O15063 1070 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 SGTAO43765 313 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 GFPT2O94808 682 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 SEC31AO94979 1220 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 FUCA1P04066 466 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 YY1P25490 414 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 RNF19BQ6ZMZ0 732 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 ANO10Q9NW15 660 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 ZMYND8Q9ULU4 1186 aaPredicted RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 RAD21O60216 631 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 RPL17P18621 184 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC11A1P49279 550 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 WDR5P61964 334 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 ETF1P62495 437 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 WASHC5Q12768 1159 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 NOGQ13253 232 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 DPYSQ14117 519 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 XKR9Q5GH70 373 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 CYP4A22Q5TCH4 519 aa6.03□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC35B2Q8TB61 432 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms