RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 VNN2O95498 520 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 CCDC130P13994 396 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 RBM10P98175 930 aaKnown RBP21.95■■□□□ 1.1
RTCA-201ENST00000260563 PTK2Q05397 1052 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 CCDC85BQ15834 202 aaPredicted RBP21.95■■□□□ 1.1
RTCA-201ENST00000260563 CFAP221Q4G0U5 840 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 RAD9BQ6WBX8 426 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 CCDC149Q6ZUS6 474 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 SLC47A2Q86VL8 602 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 CCDC170Q8IYT3 715 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 ATAD1Q8NBU5 361 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 HDAC7Q8WUI4 952 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 CCDC42Q96M95 316 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 MED10Q9BTT4 135 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 DEF6Q9H4E7 631 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 DZANK1Q9NVP4 752 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 CLDND1Q9NY35 253 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 HSFX1Q9UBD0 423 aa21.95■■□□□ 1.1
RTCA-201ENST00000260563 GLP2RO95838 553 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 C8AP07357 584 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 CD19P15391 556 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 CYP11B1P15538 503 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 EIF4A3P38919 411 aaKnown RBP21.94■■□□□ 1.1
RTCA-201ENST00000260563 PDE6CP51160 858 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 BPIFB4P59827 614 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 DUSP4Q13115 394 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 MTF1Q14872 753 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 SGO2Q562F6 1265 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 ZNF571Q7Z3V5 609 aaPredicted RBP21.94■■□□□ 1.1
RTCA-201ENST00000260563 TCEAL8Q8IYN2 117 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 SLC7A14Q8TBB6 771 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 PPM1EQ8WY54 764 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 ABCB6Q9NP58 842 aa21.94■■□□□ 1.1
RTCA-201ENST00000260563 GREB1Q4ZG55 1949 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 SEC24AO95486 1093 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 VDRP11473 427 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 CYLC1P35663 651 aaPredicted RBP21.93■■□□□ 1.1
RTCA-201ENST00000260563 ADAM15Q13444 863 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 MGAT5BQ3V5L5 792 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 TMEM184AQ6ZMB5 413 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 EP400NLQ6ZTU2 488 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 FAM35AQ86V20 835 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 SLC2A14Q8TDB8 520 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 EPS8L1Q8TE68 723 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 PABPC5Q96DU9 382 aaKnown RBP21.93■■□□□ 1.1
RTCA-201ENST00000260563 CYFIP2Q96F07 1278 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 SEPT5Q99719 369 aaPredicted RBP21.93■■□□□ 1.1
RTCA-201ENST00000260563 B3GNT5Q9BYG0 378 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 CRISPLD1Q9H336 500 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 ACP6Q9NPH0 428 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 KIAA1257Q9ULG3 409 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 PYCARDQ9ULZ3 195 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 INSL5Q9Y5Q6 135 aa21.93■■□□□ 1.1
RTCA-201ENST00000260563 SPTBN5Q9NRC6 3674 aaKnown RBP21.93■■□□□ 1.1
RTCA-201ENST00000260563 MYO16Q9Y6X6 1858 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 CLDN5O00501 218 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 BDNFP23560 247 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 ADORA2BP29275 332 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 GNA15P30679 374 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 SKIV2LQ15477 1246 aaKnown RBP21.92■■□□□ 1.1
RTCA-201ENST00000260563 ASTE1Q2TB18 679 aaPredicted RBP21.92■■□□□ 1.1
RTCA-201ENST00000260563 PPP1R26Q5T8A7 1209 aaPredicted RBP21.92■■□□□ 1.1
RTCA-201ENST00000260563 NOP9Q86U38 636 aaKnown RBP21.92■■□□□ 1.1
RTCA-201ENST00000260563 TTC9BQ8N6N2 239 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 SMARCD1Q96GM5 515 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 RHOBTB2Q9BYZ6 727 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 ZNF518BQ9C0D4 1074 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 SFXN1Q9H9B4 322 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 NOCTQ9UK39 431 aaKnown RBP21.92■■□□□ 1.1
RTCA-201ENST00000260563 ZKSCAN5Q9Y2L8 839 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 SLC27A5Q9Y2P5 690 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 YIPF1Q9Y548 306 aa21.92■■□□□ 1.1
RTCA-201ENST00000260563 EPN1Q9Y6I3 576 aaPredicted RBP21.92■■□□□ 1.1
RTCA-201ENST00000260563 AKR1B10O60218 316 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 HAPLN1P10915 354 aaPredicted RBP21.91■■□□□ 1.1
RTCA-201ENST00000260563 CYP2F1P24903 491 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 TUFMP49411 452 aaKnown RBP21.91■■□□□ 1.1
RTCA-201ENST00000260563 KIF11P52732 1056 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 COL19A1Q14993 1142 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 CTC1Q2NKJ3 1217 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 PPM1LQ5SGD2 360 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 RTL10Q7L3V2 364 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 VPS36Q86VN1 386 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 FUKQ8N0W3 1084 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 SLC20A1Q8WUM9 679 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 HNRNPABQ99729 332 aaKnown RBP21.91■■□□□ 1.1
RTCA-201ENST00000260563 AGPAT1Q99943 283 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 SYT11Q9BT88 431 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.91■■□□□ 1.1
RTCA-201ENST00000260563 KRT82Q9NSB4 513 aa21.91■■□□□ 1.1
RTCA-201ENST00000260563 ZNF638Q14966 1978 aaKnown RBP21.91■■□□□ 1.1
RTCA-201ENST00000260563 TBX10O75333 385 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 ZMYND10O75800 440 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 NDUFA10O95299 355 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 LRG1P02750 347 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 BRD2P25440 801 aaKnown RBP21.9■■□□□ 1.1
RTCA-201ENST00000260563 ANXA13P27216 316 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 MAGEA11P43364 429 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 PLD1Q13393 1074 aa21.9■■□□□ 1.1
RTCA-201ENST00000260563 STILQ15468 1287 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms