RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 MICAL1Q8TDZ2 1067 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 POF1BQ8WVV4 589 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 CPA5Q8WXQ8 436 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 SECISBP2LQ93073 1101 aaKnown RBP16.51■□□□□ 0.23
GYPC-201ENST00000259254 PGLYRP2Q96PD5 576 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 NOX5Q96PH1 765 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 PKMYT1Q99640 499 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 TCF25Q9BQ70 676 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 ZNF518BQ9C0D4 1074 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 PRDM6Q9NQX0 595 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.51■□□□□ 0.23
GYPC-201ENST00000259254 KRT82Q9NSB4 513 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 ABI2Q9NYB9 513 aaPredicted RBP16.51■□□□□ 0.23
GYPC-201ENST00000259254 MTCH2Q9Y6C9 303 aa16.51■□□□□ 0.23
GYPC-201ENST00000259254 PRRC2BQ5JSZ5 2229 aaKnown RBP16.51■□□□□ 0.23
GYPC-201ENST00000259254 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.5■□□□□ 0.23
GYPC-201ENST00000259254 RTN2O75298 545 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 AP1G2O75843 785 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 CXCL14O95715 111 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 CYP1A1P04798 512 aaPredicted RBP16.5■□□□□ 0.23
GYPC-201ENST00000259254 SETSIPP0DME0 302 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 NOMO3P69849 1222 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 UBE3AQ05086 875 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 BST2Q10589 180 aaKnown RBP16.5■□□□□ 0.23
GYPC-201ENST00000259254 PTPN14Q15678 1187 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 PLPP4Q5VZY2 271 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 ACAD10Q6JQN1 1059 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 RSPO2Q6UXX9 243 aaPredicted RBP16.5■□□□□ 0.23
GYPC-201ENST00000259254 TTC30AQ86WT1 665 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 DNAAF5Q86Y56 855 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 MICALL1Q8N3F8 863 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 MSANTD4Q8NCY6 345 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 SPPL3Q8TCT6 385 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 RHOBTB2Q9BYZ6 727 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 LHX5Q9H2C1 402 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 SYNCQ9H7C4 482 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 TAS2R14Q9NYV8 317 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 THEGQ9P2T0 379 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 PCDHB5Q9Y5E4 795 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 PCDHA13Q9Y5I0 950 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 ADGRG1Q9Y653 693 aa16.5■□□□□ 0.23
GYPC-201ENST00000259254 TRANK1O15050 2925 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 ZNF263O14978 683 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 GRM6O15303 877 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 ADAM12O43184 909 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 TBC1D4O60343 1298 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 LCA5LO95447 670 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 FTLP02792 175 aaPredicted RBP16.49■□□□□ 0.23
GYPC-201ENST00000259254 H2AFZP0C0S5 128 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 GZMAP12544 262 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 ABCB4P21439 1286 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 BDNFP23560 247 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 ERVFC1P60507 584 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 ROR1Q01973 937 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 PDE4CQ08493 712 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 GPR17Q13304 367 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 SMC1AQ14683 1233 aaKnown RBP16.49■□□□□ 0.23
GYPC-201ENST00000259254 C10orf76Q5T2E6 689 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 SLC8B1Q6J4K2 584 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 PPP1R2P3Q6NXS1 205 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 PAQR9Q6ZVX9 377 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 H2AFVQ71UI9 128 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 TXLNBQ8N3L3 684 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
GYPC-201ENST00000259254 SMARCD1Q96GM5 515 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 CLSTN3Q9BQT9 956 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 C11orf70Q9BRQ4 267 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 DUSP16Q9BY84 665 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 TLR9Q9NR96 1032 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 ST7Q9NRC1 585 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 ZKSCAN5Q9Y2L8 839 aa16.49■□□□□ 0.23
GYPC-201ENST00000259254 ZSCAN12O43309 604 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 UNGP13051 313 aaPredicted RBP16.48■□□□□ 0.23
GYPC-201ENST00000259254 NPR3P17342 541 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 DNAJB1P25685 340 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 GPD2P43304 727 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 RGS7P49802 495 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 NDUFV1P49821 464 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 MAP3K7CLP57077 242 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 CENPCQ03188 943 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 SMARCB1Q12824 385 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 PDCLQ13371 301 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 RNF19BQ6ZMZ0 732 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 MMS22LQ6ZRQ5 1243 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 ERICH1Q86X53 443 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 GPR65Q8IYL9 337 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 WDTC1Q8N5D0 677 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 ATXN2LQ8WWM7 1075 aaKnown RBP16.48■□□□□ 0.23
GYPC-201ENST00000259254 CTNNBL1Q8WYA6 563 aaPredicted RBP16.48■□□□□ 0.23
GYPC-201ENST00000259254 EMILIN2Q9BXX0 1053 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 ADAM22Q9P0K1 906 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 NENFQ9UMX5 172 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 PPP2R2CQ9Y2T4 447 aa16.48■□□□□ 0.23
GYPC-201ENST00000259254 REXO2Q9Y3B8 237 aaKnown RBP16.48■□□□□ 0.23
GYPC-201ENST00000259254 WDR27A2RRH5 827 aa16.47■□□□□ 0.23
GYPC-201ENST00000259254 MTMR11A4FU01 709 aa16.47■□□□□ 0.23
GYPC-201ENST00000259254 H3BNC9 293 aa16.47■□□□□ 0.23
GYPC-201ENST00000259254 XPO1O14980 1071 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms