RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 RAB6CQ53S08 254 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 CATSPER4Q7RTX7 472 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 RAB6CQ9H0N0 254 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 CPA4Q9UI42 421 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 OTUD4Q01804 1114 aaKnown RBP22.78■■□□□ 1.24
CLN6-201ENST00000249806 GLRA4Q5JXX5 417 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 NT5DC4Q86YG4 428 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 ZCCHC9Q8N567 271 aaKnown RBP22.78■■□□□ 1.24
CLN6-201ENST00000249806 SLC35B2Q8TB61 432 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 ACTL9Q8TC94 416 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 NKD2Q969F2 451 aaPredicted RBP22.78■■□□□ 1.24
CLN6-201ENST00000249806 SERPINB12Q96P63 405 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 MRPL45Q9BRJ2 306 aaKnown RBP22.78■■□□□ 1.24
CLN6-201ENST00000249806 SNX9Q9Y5X1 595 aa22.78■■□□□ 1.24
CLN6-201ENST00000249806 E5RJQ4 531 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 GRAP2O75791 330 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 CELF2O95319 508 aaKnown RBP22.77■■□□□ 1.24
CLN6-201ENST00000249806 STAU1O95793 577 aaKnown RBP22.77■■□□□ 1.24
CLN6-201ENST00000249806 ITGAVP06756 1048 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 PFKMP08237 780 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 SMIM10L2AP0DMW4 78 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 SMIM10L2BP0DMW5 78 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 CREB1P16220 341 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 MYO1EQ12965 1108 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 HIC1Q14526 733 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 TRNP1Q6NT89 227 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 LCLAT1Q6UWP7 414 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 ATXN2LQ8WWM7 1075 aaKnown RBP22.77■■□□□ 1.24
CLN6-201ENST00000249806 HSPH1Q92598 858 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 KAT2BQ92831 832 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 C18orf25Q96B23 403 aaPredicted RBP22.77■■□□□ 1.24
CLN6-201ENST00000249806 CENPTQ96BT3 561 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 GCOM2Q9BZD3 368 aaPredicted RBP22.77■■□□□ 1.24
CLN6-201ENST00000249806 STMN4Q9H169 189 aaPredicted RBP22.77■■□□□ 1.24
CLN6-201ENST00000249806 TUBGCP4Q9UGJ1 667 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 RRN3P2A6NIE6 340 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 RNF8O76064 485 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 MAGEA4P43358 317 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 RGS7P49802 495 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 DCAF4L1Q3SXM0 396 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 HP1BP3Q5SSJ5 553 aaPredicted RBP22.77■■□□□ 1.24
CLN6-201ENST00000249806 OR6B2Q6IFH4 312 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 CYP4F22Q6NT55 531 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 SLC27A1Q6PCB7 646 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 KCTD6Q8NC69 237 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 CCHCR1Q8TD31 782 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 TPX2Q9ULW0 747 aaKnown RBP22.77■■□□□ 1.24
CLN6-201ENST00000249806 USP18Q9UMW8 372 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 NME7Q9Y5B8 376 aa22.77■■□□□ 1.24
CLN6-201ENST00000249806 A6NJR5 290 aa22.76■■□□□ 1.23
CLN6-201ENST00000249806 GDF10P55107 478 aa22.76■■□□□ 1.23
CLN6-201ENST00000249806 PPP1R26Q5T8A7 1209 aaPredicted RBP22.76■■□□□ 1.23
CLN6-201ENST00000249806 FAM183BPQ6ZVS7 135 aa22.76■■□□□ 1.23
CLN6-201ENST00000249806 ACOT1Q86TX2 421 aa22.76■■□□□ 1.23
CLN6-201ENST00000249806 C2orf69Q8N8R5 385 aa22.76■■□□□ 1.23
CLN6-201ENST00000249806 ARHGEF2Q92974 986 aaKnown RBP22.76■■□□□ 1.23
CLN6-201ENST00000249806 FLRT1Q9NZU1 646 aa22.76■■□□□ 1.23
CLN6-201ENST00000249806 TRUB2O95900 331 aaKnown RBP22.76■■□□□ 1.23
CLN6-201ENST00000249806 PECAM1P16284 738 aaPredicted RBP22.76■■□□□ 1.23
CLN6-201ENST00000249806 C15orf59Q2T9L4 293 aaPredicted RBP22.76■■□□□ 1.23
CLN6-201ENST00000249806 RELL1Q8IUW5 271 aa22.76■■□□□ 1.23
CLN6-201ENST00000249806 CYP4X1Q8N118 509 aa22.76■■□□□ 1.23
CLN6-201ENST00000249806 PEBP4Q96S96 227 aa22.76■■□□□ 1.23
CLN6-201ENST00000249806 SAYSD1Q9NPB0 183 aa22.76■■□□□ 1.23
CLN6-201ENST00000249806 INTS9Q9NV88 658 aaKnown RBP22.76■■□□□ 1.23
CLN6-201ENST00000249806 TBK1Q9UHD2 729 aa22.76■■□□□ 1.23
CLN6-201ENST00000249806 DDX20Q9UHI6 824 aaKnown RBP22.76■■□□□ 1.23
CLN6-201ENST00000249806 GNEQ9Y223 722 aaKnown RBP22.76■■□□□ 1.23
CLN6-201ENST00000249806 TRIP12Q14669 1992 aaPredicted RBP22.75■■□□□ 1.23
CLN6-201ENST00000249806 SLC15A5A6NIM6 579 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 TAZQ16635 292 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 GOLGA7BQ2TAP0 167 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 BBS12Q6ZW61 710 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 TAOK1Q7L7X3 1001 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 CMASQ8NFW8 434 aaPredicted RBP22.75■■□□□ 1.23
CLN6-201ENST00000249806 RXFP2Q8WXD0 754 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 SNX27Q96L92 541 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 PRMT1Q99873 361 aaKnown RBP22.75■■□□□ 1.23
CLN6-201ENST00000249806 LPIN3Q9BQK8 851 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 APOL6Q9BWW8 343 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 CALN1Q9BXU9 219 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 NXF3Q9H4D5 531 aaKnown RBP22.75■■□□□ 1.23
CLN6-201ENST00000249806 PLEKHA5Q9HAU0 1116 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 FAM49BQ9NUQ9 324 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 GJD2Q9UKL4 321 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 EFR3BQ9Y2G0 817 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 NRCAMQ92823 1304 aa22.75■■□□□ 1.23
CLN6-201ENST00000249806 CYP2C9P11712 490 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 PDGFRAP16234 1089 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 AKAP5P24588 427 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 ZNF143P52747 638 aaPredicted RBP22.74■■□□□ 1.23
CLN6-201ENST00000249806 FKBP1BP68106 108 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 FASTKD3Q14CZ7 662 aaKnown RBP22.74■■□□□ 1.23
CLN6-201ENST00000249806 ZBTB6Q15916 424 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 CDO1Q16878 200 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 OLFML2BQ68BL8 750 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 PMF1Q6P1K2 205 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 DNAJB3Q8WWF6 145 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 ASNSD1Q9NWL6 643 aa22.74■■□□□ 1.23
CLN6-201ENST00000249806 KIAA1257Q9ULG3 409 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms