RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PLA2G4AP47712 749 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 RGS19P49795 217 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 DSG1Q02413 1049 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 ZNF268Q14587 947 aaPredicted RBP13.68□□□□□ -0.22
LSM8-201ENST00000249299 GOLGA7BQ2TAP0 167 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 CTXN3Q4LDR2 81 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 SLC8B1Q6J4K2 584 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 FAM117BQ6P1L5 589 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 VSTM1Q6UX27 236 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 TMEM110Q86TL2 294 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 ERICH1Q86X53 443 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 GPIHBP1Q8IV16 184 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 WDTC1Q8N5D0 677 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 SLC2A14Q8TDB8 520 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 KCTD13Q8WZ19 329 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 SMARCD1Q96GM5 515 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 PCED1BQ96HM7 432 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 RNPC3Q96LT9 517 aaKnown RBP13.68□□□□□ -0.22
LSM8-201ENST00000249299 SLC4A5Q9BY07 1137 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 LACRTQ9GZZ8 138 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 CSNK1G1Q9HCP0 422 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 TRMT1Q9NXH9 659 aaKnown RBP13.68□□□□□ -0.22
LSM8-201ENST00000249299 TAS2R14Q9NYV8 317 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 ADAM22Q9P0K1 906 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 MTRRQ9UBK8 725 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 PCDHA11Q9Y5I1 949 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 SCINQ9Y6U3 715 aa13.68□□□□□ -0.22
LSM8-201ENST00000249299 MYBPHLA2RUH7 354 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 NT5C1B-RDH14C9J2C7 533 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 FAM200BP0CF97 657 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 BMPR1AP36894 532 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 MAGEA11P43364 429 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 GLUD2P49448 558 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 PTP4A2Q12974 167 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 GPR17Q13304 367 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 PDCLQ13371 301 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 MDH1BQ5I0G3 518 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 KIAA0319Q5VV43 1072 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 PLEKHA7Q6IQ23 1121 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 KIAA1841Q6NSI8 718 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 DENND1BQ6P3S1 775 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 NYAP1Q6ZVC0 841 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 ARCQ7LC44 396 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 TTC30AQ86WT1 665 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 TMEM173Q86WV6 379 aaPredicted RBP13.67□□□□□ -0.22
LSM8-201ENST00000249299 C1orf131Q8NDD1 294 aaKnown RBP13.67□□□□□ -0.22
LSM8-201ENST00000249299 TRIM58Q8NG06 486 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 OR10T2Q8NGX3 314 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 SPPL2BQ8TCT7 592 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 IPO4Q8TEX9 1081 aaKnown RBP13.67□□□□□ -0.22
LSM8-201ENST00000249299 BCL7CQ8WUZ0 217 aaPredicted RBP13.67□□□□□ -0.22
LSM8-201ENST00000249299 CPA5Q8WXQ8 436 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 C18orf8Q96DM3 657 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 PARVAQ9NVD7 372 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 FNIP2Q9P278 1114 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 HCSTQ9UBK5 93 aa13.67□□□□□ -0.22
LSM8-201ENST00000249299 RCCD1A6NED2 376 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 ATP2C2O75185 946 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 FGF18O76093 207 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 URODP06132 367 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 CFHP08603 1231 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 ACAT1P24752 427 aaKnown RBP13.66□□□□□ -0.22
LSM8-201ENST00000249299 PSMC1P62191 440 aaKnown RBP13.66□□□□□ -0.22
LSM8-201ENST00000249299 ETF1P62495 437 aaKnown RBP13.66□□□□□ -0.22
LSM8-201ENST00000249299 ORC1Q13415 861 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 SHHQ15465 462 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 PTPN14Q15678 1187 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 RTP2Q5QGT7 225 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 TPGS2Q68CL5 300 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 PDE12Q6L8Q7 609 aaKnown RBP13.66□□□□□ -0.22
LSM8-201ENST00000249299 PAQR9Q6ZVX9 377 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 TMCO2Q7Z6W1 182 aaPredicted RBP13.66□□□□□ -0.22
LSM8-201ENST00000249299 FAM35AQ86V20 835 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 PLPP6Q8IY26 295 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 SCML4Q8N228 414 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 C3orf20Q8ND61 904 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 SECISBP2LQ93073 1101 aaKnown RBP13.66□□□□□ -0.22
LSM8-201ENST00000249299 B3GNT5Q9BYG0 378 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 THAP2Q9H0W7 228 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 FAM49BQ9NUQ9 324 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 IRAK3Q9Y616 596 aa13.66□□□□□ -0.22
LSM8-201ENST00000249299 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.65□□□□□ -0.22
LSM8-201ENST00000249299 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.65□□□□□ -0.22
LSM8-201ENST00000249299 USP27XA6NNY8 438 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 TMCO5BA8MYB1 307 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 SART1O43290 800 aaKnown RBP13.65□□□□□ -0.22
LSM8-201ENST00000249299 FBXO21O94952 628 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 CTSAP10619 480 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 CCDC130P13994 396 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 PBX3P40426 434 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 PDE4CQ08493 712 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 PTPN20Q4JDL3 420 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 PPP1R15BQ5SWA1 713 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 C9orf50Q5SZB4 431 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 SPATA2LQ8IUW3 424 aaPredicted RBP13.65□□□□□ -0.22
LSM8-201ENST00000249299 PASD1Q8IV76 773 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 SYCE1Q8N0S2 351 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 MYLPFQ96A32 169 aa13.65□□□□□ -0.22
LSM8-201ENST00000249299 ALS2CR12Q96Q35 445 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms