RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CASP10Q92851 521 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 DGCR6LQ9BY27 220 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 ALDH6A1Q02252 535 aaKnown RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 RNF220Q5VTB9 566 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 FUKQ8N0W3 1084 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 MAGED4Q96JG8 741 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 TAS2R14Q9NYV8 317 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 ITM2BQ9Y287 266 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 PKP3Q9Y446 797 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 PRKCBP05771 671 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 ABI1Q8IZP0 508 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 TTC13Q8NBP0 860 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 FEZF2Q8TBJ5 459 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 BSDC1Q9NW68 430 aaPredicted RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 SLC12A6Q9UHW9 1150 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 ARHGEF5Q12774 1597 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 APOA1P02647 267 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 F7P08709 466 aaPredicted RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 COPAP53621 1224 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.81□□□□□ -1.162e-6■■■■■ 54.9
RIF1-201ENST00000243326 MTERF3Q96E29 417 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 H0Y626 953 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 KRT7P08729 469 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 SPOCD1Q6ZMY3 1216 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 KRT16P08779 473 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 SSTR1P30872 391 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 ITGADQ13349 1161 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 PTPRN2Q92932 1015 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 CELF6Q96J87 481 aaKnown RBP7.81□□□□□ -1.16
RIF1-201ENST00000243326 CCDC17Q96LX7 622 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 TRIM39Q9HCM9 518 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 CHST7Q9NS84 486 aa7.81□□□□□ -1.16
RIF1-201ENST00000243326 PTGES3LE9PB15 166 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 F5H6K3 240 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 KATNA1O75449 491 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 SLC16A1P53985 500 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 KLRC3Q07444 240 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 FAAP100Q0VG06 881 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 RNASE12Q5GAN4 147 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 NANOGNBQ7Z5D8 188 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 VN1R5Q7Z5H4 357 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 TDRD5Q8NAT2 981 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 ALDH8A1Q9H2A2 487 aaPredicted RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 MADDQ8WXG6 1647 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 TPD52L2O43399 206 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 GSTT1P30711 240 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 GALK1P51570 392 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 TMC3Q7Z5M5 1100 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 PPIL6Q8IXY8 311 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 SENP6Q9GZR1 1112 aaPredicted RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 CACNA1EQ15878 2313 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 DDHD2O94830 711 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 ACADSP16219 412 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 DDX5P17844 614 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 SPP2Q13103 211 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 DNAL1Q4LDG9 190 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 OTOAQ7RTW8 1153 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 DDHD1Q8NEL9 900 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 SLC7A14Q8TBB6 771 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 KCNK16Q96T55 309 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 THUMPD3Q9BV44 507 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 SPHKAPQ2M3C7 1700 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 FAM237BA0A1B0GVD1 139 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 RRN3P2A6NIE6 340 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 DCDC2CA8MYV0 355 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 HUS1O60921 280 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 SNX32Q86XE0 403 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 RPAP3Q9H6T3 665 aaPredicted RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 IQCA1LA6NCM1 817 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 NR4A1P22736 598 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 PAPD7Q5XG87 772 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 RBM44Q6ZP01 1051 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 MTFMTQ96DP5 389 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 C6orf62Q9GZU0 229 aaPredicted RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 PABPC3Q9H361 631 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 JMJD4Q9H9V9 463 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 FBXO28Q9NVF7 368 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 VEGFAP15692 232 aaPredicted RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 RRM1P23921 792 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 TEDDM1Q5T9Z0 273 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 RCSD1Q6JBY9 416 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 BBS5Q8N3I7 341 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 ZSWIM1Q9BR11 485 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 EML4Q9HC35 981 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 TAGLN3Q9UI15 199 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 PLA2G4CQ9UP65 541 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 RSBN1Q5VWQ0 802 aaPredicted RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 SGMS1Q86VZ5 419 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 SPATA6LQ8N4H0 392 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 MYH9P35579 1960 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 ALBP02768 609 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 TGM2P21980 687 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 GRAPQ13588 217 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 NFIL3Q16649 462 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 C12orf60Q5U649 245 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 SCIMPQ6UWF3 145 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 GRAPLQ8TC17 118 aaPredicted RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 NSUN4Q96CB9 384 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 MTMR12Q9C0I1 747 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 CCDC134Q9H6E4 229 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms