RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 ARFGAP1Q8N6T3 406 aa19.63■□□□□ 0.73
CPSF3-201ENST00000238112 CAMKK2Q96RR4 588 aa19.63■□□□□ 0.73
CPSF3-201ENST00000238112 XYLT2Q9H1B5 865 aa19.63■□□□□ 0.73
CPSF3-201ENST00000238112 ZMYND8Q9ULU4 1186 aaPredicted RBP19.63■□□□□ 0.73
CPSF3-201ENST00000238112 GJA3Q9Y6H8 435 aa19.63■□□□□ 0.73
CPSF3-201ENST00000238112 SMAPO00193 183 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 ADRA1DP25100 572 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 MXD4Q14582 209 aaPredicted RBP19.62■□□□□ 0.73
CPSF3-201ENST00000238112 ZC3H12AQ5D1E8 599 aaKnown RBP19.62■□□□□ 0.73
CPSF3-201ENST00000238112 ZNF449Q6P9G9 518 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 SEPT1Q8WYJ6 367 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 NPHS2Q9NP85 383 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 METTL5Q9NRN9 209 aaKnown RBP19.62■□□□□ 0.73
CPSF3-201ENST00000238112 WDR35Q9P2L0 1181 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 PCSK1NQ9UHG2 260 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 XPO7Q9UIA9 1087 aaKnown RBP19.62■□□□□ 0.73
CPSF3-201ENST00000238112 POLIQ9UNA4 740 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 E7ESA3 106 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 KRT19P08727 400 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 TROVE2P10155 538 aaKnown RBP eCLIP19.62■□□□□ 0.73
CPSF3-201ENST00000238112 SLC8A3P57103 927 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 OSTNP61366 133 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 BASP1P80723 227 aaKnown RBP19.62■□□□□ 0.73
CPSF3-201ENST00000238112 MTM1Q13496 603 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 NAA25Q14CX7 972 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 TMEM132AQ24JP5 1023 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 CCDC125Q86Z20 511 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 EMC1Q8N766 993 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 ALKBH8Q96BT7 664 aaKnown RBP19.62■□□□□ 0.73
CPSF3-201ENST00000238112 FAM167AQ96KS9 214 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 DHRS4Q9BTZ2 278 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 CYTH4Q9UIA0 394 aa19.62■□□□□ 0.73
CPSF3-201ENST00000238112 WDR91A4D1P6 747 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 MCF2LO15068 1137 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 TM9SF1O15321 606 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 PIAS1O75925 651 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 CD48P09326 243 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 MARK3P27448 753 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 RAP1GAPP47736 663 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 EIF3EP60228 445 aaKnown RBP19.61■□□□□ 0.73
CPSF3-201ENST00000238112 UNC45BQ8IWX7 931 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 KIAA0319LQ8IZA0 1049 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 FAM71DQ8N9W8 422 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 TCP10LQ8TDR4 215 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 C2orf40Q9H1Z8 148 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 ZFP69BQ9UJL9 534 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 PPME1Q9Y570 386 aa19.61■□□□□ 0.73
CPSF3-201ENST00000238112 APOC4-APOC2K7ER74 178 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 ABLIM1O14639 778 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 TMEM63AO94886 807 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 APOC2P02655 101 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 FGFR1P11362 822 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 RNASELQ05823 741 aaKnown RBP19.6■□□□□ 0.73
CPSF3-201ENST00000238112 CRYMQ14894 314 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 TAZQ16635 292 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 SLC45A4Q5BKX6 768 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 MPZL3Q6UWV2 235 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 NLRP9Q7RTR0 991 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 LRRC71Q8N4P6 559 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 HSPH1Q92598 858 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 CPXM1Q96SM3 734 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 WDR83Q9BRX9 315 aaKnown RBP19.6■□□□□ 0.73
CPSF3-201ENST00000238112 CYLDQ9NQC7 956 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 TCRBV7S3A2A0A539 114 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 GOLGA8RI6L899 631 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 C2CD2LO14523 706 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 RNF8O76064 485 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 TAF1BQ53T94 588 aaPredicted RBP19.6■□□□□ 0.73
CPSF3-201ENST00000238112 ZNF667Q5HYK9 610 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 SPDYAQ5MJ70 313 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 XYLT1Q86Y38 959 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 ZNF398Q8TD17 642 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 DCAKDQ8WVC6 231 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 CALN1Q9BXU9 219 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 AFG3L2Q9Y4W6 797 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 LCTP09848 1927 aa19.6■□□□□ 0.73
CPSF3-201ENST00000238112 GAS2O43903 313 aaKnown RBP19.59■□□□□ 0.73
CPSF3-201ENST00000238112 B4GALT4O60513 344 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 TSHRP16473 764 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 DALRD3Q5D0E6 543 aaKnown RBP19.59■□□□□ 0.73
CPSF3-201ENST00000238112 SMYD5Q6GMV2 418 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 BANPQ8N9N5 519 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 CYTH2Q99418 400 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 IKBKGQ9Y6K9 419 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 CBX6O95503 412 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 ERBB2P04626 1255 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 T-ENOLP0DO92 83 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 RBP3P10745 1247 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 RXRBP28702 533 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 ATF7IP2Q5U623 682 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 ANGEL2Q5VTE6 544 aaKnown RBP19.59■□□□□ 0.73
CPSF3-201ENST00000238112 METTL7BQ6UX53 244 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 LONP2Q86WA8 852 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 SPATA18Q8TC71 538 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 MZB1Q8WU39 189 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 MIEF2Q96C03 454 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 KLF6Q99612 283 aaPredicted RBP19.59■□□□□ 0.73
CPSF3-201ENST00000238112 CHMP2BQ9UQN3 213 aa19.59■□□□□ 0.73
CPSF3-201ENST00000238112 MT-ND3P03897 115 aa19.58■□□□□ 0.73
CPSF3-201ENST00000238112 MIPP30301 263 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms