RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 DGUOKQ16854 277 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 USP17L6PQ6QN14 398 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 SGMS1Q86VZ5 419 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 OR6Y1Q8NGX8 325 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 NEDD1Q8NHV4 660 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 MAGEC3Q8TD91 643 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 CELF1Q92879 486 aaKnown RBP10.84□□□□□ -0.67
VCL-201ENST00000211998 USP13Q92995 863 aaPredicted RBP10.84□□□□□ -0.67
VCL-201ENST00000211998 OXNAD1Q96HP4 312 aaPredicted RBP10.84□□□□□ -0.67
VCL-201ENST00000211998 MMP19Q99542 508 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 FAM213AQ9BRX8 229 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 C17orf80Q9BSJ5 609 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 TIPINQ9BVW5 301 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 ASB14A6NK59 587 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 KRT36O76013 467 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 PSMB9P28065 219 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 ERVK-9P63128 1117 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 USP4Q13107 963 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 COG2Q14746 738 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 PPIL6Q8IXY8 311 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 KLHL31Q9H511 634 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 CASS4Q9NQ75 786 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 RBMX2Q9Y388 322 aaKnown RBP10.84□□□□□ -0.67
VCL-201ENST00000211998 AFF2P51816 1311 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 TULP4Q9NRJ4 1543 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 NPHP3-ACAD11A0A0J9YXS1 232 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 STX7O15400 261 aaKnown RBP10.84□□□□□ -0.67
VCL-201ENST00000211998 SLC16A3O15427 465 aaKnown RBP10.84□□□□□ -0.67
VCL-201ENST00000211998 S100A9P06702 114 aaKnown RBP10.84□□□□□ -0.67
VCL-201ENST00000211998 FDPSP14324 419 aaKnown RBP10.84□□□□□ -0.67
VCL-201ENST00000211998 STAT3P40763 770 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 GPSM2P81274 684 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 TAP1Q03518 808 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 PDPK2PQ6A1A2 396 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 CENPTQ96BT3 561 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 ZSWIM1Q9BR11 485 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 ILKAPQ9H0C8 392 aaPredicted RBP10.84□□□□□ -0.67
VCL-201ENST00000211998 MPP6Q9NZW5 540 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 MAFGO15525 162 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 KLHL41O60662 606 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 CTDNEP1O95476 244 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 KCNK10P57789 538 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 PTK2BQ14289 1009 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 KRT33BQ14525 404 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 QRICH1Q2TAL8 776 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 PID1Q7Z2X4 250 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 C19orf18Q8NEA5 215 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 MAGED4Q96JG8 741 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 PACSIN1Q9BY11 444 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 ARMCX1Q9P291 453 aa10.84□□□□□ -0.67
VCL-201ENST00000211998 CHORDC1Q9UHD1 332 aaPredicted RBP10.84□□□□□ -0.67
VCL-201ENST00000211998 ATXN2Q99700 1313 aaKnown RBP10.83□□□□□ -0.67
VCL-201ENST00000211998 F5H6K3 240 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 RAD51BO15315 384 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 SLC26A4O43511 780 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 TNFRSF21O75509 655 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 KLRC3Q07444 240 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 TRIM28Q13263 835 aaKnown RBP10.83□□□□□ -0.68
VCL-201ENST00000211998 SLC10A5Q5PT55 438 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 SYTL1Q8IYJ3 562 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 ADGRF4Q8IZF3 695 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 TBC1D10AQ9BXI6 508 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 KIAA1683Q9H0B3 1180 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 POLR3FQ9H1D9 316 aaPredicted RBP10.83□□□□□ -0.68
VCL-201ENST00000211998 CPVLQ9H3G5 476 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 FANCEQ9HB96 536 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 SARS2Q9NP81 518 aaKnown RBP10.83□□□□□ -0.68
VCL-201ENST00000211998 TMEM161AQ9NX61 479 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 GABBR1Q9UBS5 961 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 CRB1P82279 1406 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 CLOCKO15516 846 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 RALAP11233 206 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 CDK17Q00537 523 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 TAF2Q6P1X5 1199 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 HPS1Q92902 700 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 IFT43Q96FT9 208 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 DHX35Q9H5Z1 703 aaKnown RBP10.83□□□□□ -0.68
VCL-201ENST00000211998 CACNA2D2Q9NY47 1150 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 NRKQ7Z2Y5 1582 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 TRPC5OSA6NMA1 111 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 E9PBE3 544 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 SPRP35270 261 aaPredicted RBP10.83□□□□□ -0.68
VCL-201ENST00000211998 NR1H2P55055 460 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 EPHA7Q15375 998 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 FUT11Q495W5 492 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 MFSD14CQ5VZR4 134 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 ITPRIPL1Q6GPH6 555 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 FASTKD5Q7L8L6 764 aaKnown RBP10.83□□□□□ -0.68
VCL-201ENST00000211998 ZNF560Q96MR9 790 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 SYNDIG1LA6NDD5 238 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 TM9SF1O15321 606 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 BAIAP3O94812 1187 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 KRT6AP02538 564 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 KRT6BP04259 564 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 DRD4P21917 467 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 KRT6CP48668 564 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 EFNA5P52803 228 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 C12orf60Q5U649 245 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 ATG14Q6ZNE5 492 aa10.83□□□□□ -0.68
VCL-201ENST00000211998 TSPAN14Q8NG11 270 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms