RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 CNGA2Q16280 664 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 QPCTQ16769 361 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 DUSP28Q4G0W2 176 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 CCDC38Q502W7 563 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 MAP1SQ66K74 1059 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-211ENST00000641213 GPR142Q7Z601 462 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 DPP9Q86TI2 863 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 EXOC3L1Q86VI1 746 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 HAUS1Q96CS2 278 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 HEXIM2Q96MH2 286 aaKnown RBP17.97■□□□□ 0.47
PHGDH-211ENST00000641213 RASSF4Q9H2L5 321 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 GGA2Q9UJY4 613 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 C5orf60A6NFR6 353 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 M0QYV0 167 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 DNALI1O14645 258 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-211ENST00000641213 MMP3P08254 477 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 KRT7P08729 469 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 VDRP11473 427 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 HOXD8P13378 290 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-211ENST00000641213 ETS1P14921 441 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 GPD2P43304 727 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 ARSEP51690 589 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 SMTNL2Q2TAL5 461 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 MICALCLQ6ZW33 695 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 TAOK1Q7L7X3 1001 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 ZCCHC9Q8N567 271 aaKnown RBP17.97■□□□□ 0.47
PHGDH-211ENST00000641213 NKD2Q969F2 451 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-211ENST00000641213 MCRS1Q96EZ8 462 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 MAML3Q96JK9 1138 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 FOXP3Q9BZS1 431 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 BARX2Q9UMQ3 279 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-211ENST00000641213 TCEA3O75764 348 aa17.96■□□□□ 0.47
PHGDH-211ENST00000641213 HMGCRP04035 888 aa17.96■□□□□ 0.47
PHGDH-211ENST00000641213 ITGAVP06756 1048 aa17.96■□□□□ 0.47
PHGDH-211ENST00000641213 RBP5P82980 135 aa17.96■□□□□ 0.47
PHGDH-211ENST00000641213 INCA1Q0VD86 236 aa17.96■□□□□ 0.47
PHGDH-211ENST00000641213 GRB14Q14449 540 aa17.96■□□□□ 0.47
PHGDH-211ENST00000641213 HADHQ16836 314 aaKnown RBP17.96■□□□□ 0.47
PHGDH-211ENST00000641213 KCNT1Q5JUK3 1230 aa17.96■□□□□ 0.47
PHGDH-211ENST00000641213 ANKRD23Q86SG2 305 aa17.96■□□□□ 0.47
PHGDH-211ENST00000641213 RBM15Q96T37 977 aaKnown RBP eCLIP17.96■□□□□ 0.474e-7■■■□□ 17.3
PHGDH-211ENST00000641213 ADPGKQ9BRR6 497 aa17.96■□□□□ 0.47
PHGDH-211ENST00000641213 DDX20Q9UHI6 824 aaKnown RBP17.96■□□□□ 0.47
PHGDH-211ENST00000641213 EFR3BQ9Y2G0 817 aa17.96■□□□□ 0.47
PHGDH-211ENST00000641213 DOCK3Q8IZD9 2030 aa17.96■□□□□ 0.47
PHGDH-211ENST00000641213 A0A087WUV0 522 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-211ENST00000641213 IQCA1LA6NCM1 817 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 STAU1O95793 577 aaKnown RBP17.95■□□□□ 0.46
PHGDH-211ENST00000641213 NDST1P52848 882 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 ZNF410Q86VK4 478 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 NT5DC4Q86YG4 428 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 OR6J1Q8NGC5 347 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 SLC35B2Q8TB61 432 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 UBA3Q8TBC4 463 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 C9orf72Q96LT7 481 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 INTS9Q9NV88 658 aaKnown RBP17.95■□□□□ 0.46
PHGDH-211ENST00000641213 CLEC11AQ9Y240 323 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 DRD4P21917 467 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 KDELR1P24390 212 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 GRM5P41594 1212 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 GPS1Q13098 491 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 TAZQ16635 292 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 CHADLQ6NUI6 762 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 C6orf89Q6UWU4 347 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 PNMA8AQ86V59 439 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-211ENST00000641213 ARHGEF2Q92974 986 aaKnown RBP17.95■□□□□ 0.46
PHGDH-211ENST00000641213 KIF12Q96FN5 646 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 CHMP6Q96FZ7 201 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 TINF2Q9BSI4 451 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 TMEM121Q9BTD3 319 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 CTNNAL1Q9UBT7 734 aa17.95■□□□□ 0.46
PHGDH-211ENST00000641213 TPX2Q9ULW0 747 aaKnown RBP17.95■□□□□ 0.46
PHGDH-211ENST00000641213 TRIP12Q14669 1992 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-211ENST00000641213 ADCY6O43306 1168 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 CYP3A5P20815 502 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 MAGEA4P43358 317 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 PSMC4P43686 418 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 PLCB3Q01970 1234 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 ACVR2BQ13705 512 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 DGKDQ16760 1214 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 CEP128Q6ZU80 1094 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 DPH6Q7L8W6 267 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 YTHDF3Q7Z739 585 aaKnown RBP17.94■□□□□ 0.46
PHGDH-211ENST00000641213 ZNF317Q96PQ6 595 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-211ENST00000641213 CXCL16Q9H2A7 254 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 ABHD16BQ9H3Z7 469 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 SETD4Q9NVD3 440 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 SAE1Q9UBE0 346 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-211ENST00000641213 KIAA0754O94854 1291 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 DYNLT1P63172 113 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 KIZQ2M2Z5 673 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 BBS12Q6ZW61 710 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 CPLX4Q7Z7G2 160 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 SEC16BQ96JE7 1060 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 FAM124BQ9H5Z6 455 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-211ENST00000641213 PCSK1NQ9UHG2 260 aa17.94■□□□□ 0.46
PHGDH-211ENST00000641213 SGK1O00141 431 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 CST8O60676 142 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 NPTXRO95502 500 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 CD48P09326 243 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms