RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 CEP83Q9Y592 693 aa9.3□□□□□ -0.92
HLA-B-258ENST00000640615 PCDHA11Q9Y5I1 949 aa9.3□□□□□ -0.92
HLA-B-258ENST00000640615 FNDC1Q4ZHG4 1894 aaPredicted RBP9.3□□□□□ -0.92
HLA-B-258ENST00000640615 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 OR6C75A6NL08 312 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 CLDN5O00501 218 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 ZSCAN12O43309 604 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 RTN2O75298 545 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 LSM8O95777 96 aaKnown RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 FTLP02792 175 aaPredicted RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 SOD2P04179 222 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 URODP06132 367 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 CA3P07451 260 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 H2AFZP0C0S5 128 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 GZMAP12544 262 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 UNGP13051 313 aaPredicted RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 MSNP26038 577 aaKnown RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 NSFP46459 744 aaKnown RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 GLUD2P49448 558 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 SMAD3P84022 425 aaKnown RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 PLCB3Q01970 1234 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 MAPRE1Q15691 268 aaKnown RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 PSMD5Q16401 504 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 C10orf76Q5T2E6 689 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 ACAD10Q6JQN1 1059 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 FAM171BQ6P995 826 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 H2AFVQ71UI9 128 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 LRRTM3Q86VH5 581 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 DNAAF5Q86Y56 855 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 RNF168Q8IYW5 571 aaPredicted RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 DCP1BQ8IZD4 617 aaKnown RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 C17orf53Q8N3J3 647 aaPredicted RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 C1orf131Q8NDD1 294 aaKnown RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 KIAA1524Q8TCG1 905 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 SECISBP2LQ93073 1101 aaKnown RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 MYLPFQ96A32 169 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 PCED1BQ96HM7 432 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 C17orf80Q9BSJ5 609 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 COL25A1Q9BXS0 654 aaPredicted RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 ZNF518BQ9C0D4 1074 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 ZCWPW1Q9H0M4 648 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 LHX5Q9H2C1 402 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 CHST7Q9NS84 486 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 STK39Q9UEW8 545 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 MSRAQ9UJ68 235 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 MTUS1Q9ULD2 1270 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 YBX2Q9Y2T7 364 aaKnown RBP9.29□□□□□ -0.92
HLA-B-258ENST00000640615 RWDD3Q9Y3V2 267 aa9.29□□□□□ -0.92
HLA-B-258ENST00000640615 TMEM265A0A087WTH1 108 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 USP27XA6NNY8 438 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 CCP110O43303 1012 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 ARHGEF15O94989 841 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 CPB1P15086 417 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 RPL17P18621 184 aaKnown RBP9.28□□□□□ -0.92
HLA-B-258ENST00000640615 DNAJB2P25686 324 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 CA8P35219 290 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 PBX2P40425 430 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 VAV2P52735 878 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 GALCP54803 685 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 SLC8A3P57103 927 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 NOMO3P69849 1222 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 DSG1Q02413 1049 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 SLC39A12Q504Y0 691 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 PPP1R2P3Q6NXS1 205 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 RSPO2Q6UXX9 243 aaPredicted RBP9.28□□□□□ -0.92
HLA-B-258ENST00000640615 PAQR9Q6ZVX9 377 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 ZSCAN30Q86W11 494 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 TTC30AQ86WT1 665 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 ERICH1Q86X53 443 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 SPATA2LQ8IUW3 424 aaPredicted RBP9.28□□□□□ -0.92
HLA-B-258ENST00000640615 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.28□□□□□ -0.92
HLA-B-258ENST00000640615 FUKQ8N0W3 1084 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 CCAR2Q8N163 923 aaKnown RBP9.28□□□□□ -0.92
HLA-B-258ENST00000640615 TXLNBQ8N3L3 684 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 WDTC1Q8N5D0 677 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 ANKRD52Q8NB46 1076 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 PIK3R5Q8WYR1 880 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 NOX5Q96PH1 765 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 PKMYT1Q99640 499 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 PLVAPQ9BX97 442 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 PACSIN1Q9BY11 444 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 OXCT2Q9BYC2 517 aaPredicted RBP9.28□□□□□ -0.92
HLA-B-258ENST00000640615 ISCUQ9H1K1 167 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 SYNCQ9H7C4 482 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 ALG13Q9NP73 1137 aaKnown RBP9.28□□□□□ -0.92
HLA-B-258ENST00000640615 ST7Q9NRC1 585 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 MRPL17Q9NRX2 175 aaKnown RBP9.28□□□□□ -0.92
HLA-B-258ENST00000640615 KRT82Q9NSB4 513 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 TMLHEQ9NVH6 421 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 NENFQ9UMX5 172 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 TFR2Q9UP52 801 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 BACE2Q9Y5Z0 518 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 CDY1Q9Y6F8 540 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 ATP8B3O60423 1300 aa9.28□□□□□ -0.92
HLA-B-258ENST00000640615 A0A0U1RQJ8 604 aa9.27□□□□□ -0.93
HLA-B-258ENST00000640615 RCCD1A6NED2 376 aa9.27□□□□□ -0.93
HLA-B-258ENST00000640615 TBC1D4O60343 1298 aa9.27□□□□□ -0.93
HLA-B-258ENST00000640615 AP1G2O75843 785 aa9.27□□□□□ -0.93
HLA-B-258ENST00000640615 CXCL14O95715 111 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms