RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 MAN2B1O00754 1011 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 CHADO15335 359 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 ATP2C2O75185 946 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 CST3P01034 146 aaPredicted RBP15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 RPN1P04843 607 aaKnown RBP15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 CSH1P0DML2 217 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 CSH2P0DML3 217 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 LMO2P25791 158 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 CASP4P49662 377 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 NLRP12P59046 1061 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 RPL10AP62906 217 aaKnown RBP15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 FCHO2Q0JRZ9 810 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 SCN4BQ8IWT1 228 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 CSGALNACT1Q8TDX6 532 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 ZNF516Q92618 1163 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 MYLPFQ96A32 169 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 ZFYVE19Q96K21 471 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 NELL2Q99435 816 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 SLC46A2Q9BY10 475 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 SCAND2PQ9GZW5 306 aaPredicted RBP15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 CRTAC1Q9NQ79 661 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 CDH9Q9ULB4 789 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 R4GN57 208 aa15.42■□□□□ 0.06
HNRNPU-229ENST00000640440 SLC38A8A6NNN8 435 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 NCAM2O15394 837 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 CLSTN1O94985 981 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 F11P03951 625 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 MYL1P05976 194 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 PDGFRBP09619 1106 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 PRR29P0C7W0 189 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 SP9P0CG40 484 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 WARSP23381 471 aaKnown RBP15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 MAGEA9P43362 315 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 MYL6P60660 151 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 TNNC1P63316 161 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 PSMD2Q13200 908 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 TRPC3Q13507 836 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 CFAP221Q4G0U5 840 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 FAM171BQ6P995 826 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 C4orf50Q6ZRC1 276 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 MAML2Q8IZL2 1156 aaPredicted RBP15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 MAB21L3Q8N8X9 362 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 PLEKHO2Q8TD55 490 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 FAM3CQ92520 227 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 CLDN23Q96B33 292 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 FUBP3Q96I24 572 aaKnown RBP eCLIP15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 MRPL45Q9BRJ2 306 aaKnown RBP15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 SNX25Q9H3E2 840 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 KCTD10Q9H3F6 313 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 GOLPH3LQ9H4A5 285 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 GDPD2Q9HCC8 539 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 OBP2AQ9NY56 170 aa15.41■□□□□ 0.06
HNRNPU-229ENST00000640440 FAM237AA0A1B0GTK4 181 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 A0A1W2PQ27 194 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 A0A1W2PQ64 194 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 A0A1W2PQD8 194 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 LAMTOR5O43504 91 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 PHACTR2O75167 634 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 TADA3O75528 432 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 NOL4O94818 638 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 NR3C1P04150 777 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 CCNE1P24864 410 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 WEE1P30291 646 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 AVPR1AP37288 418 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 SOX9P48436 509 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 FZD5Q13467 585 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 BIRC3Q13489 604 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 WDR72Q3MJ13 1102 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 ARHGAP29Q52LW3 1261 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 TDRD10Q5VZ19 366 aaKnown RBP15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 TXNDC8Q6A555 127 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 CMTM8Q8IZV2 173 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 ZNF687Q8N1G0 1237 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 OR6B3Q8NGW1 331 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 TTC8Q8TAM2 541 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 BPIFB1Q8TDL5 484 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 MRPS31Q92665 395 aaKnown RBP15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 NXF1Q9UBU9 619 aaKnown RBP15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 ZMYM5Q9UJ78 669 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 NME7Q9Y5B8 376 aa15.4■□□□□ 0.06
HNRNPU-229ENST00000640440 LRRIQ3A6PVS8 624 aaPredicted RBP15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 BDNFP23560 247 aa15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 DDX6P26196 483 aaKnown RBP eCLIP15.39■□□□□ 0.052e-7■■□□□ 14.1
HNRNPU-229ENST00000640440 GNL1P36915 607 aaPredicted RBP15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 MAGEA11P43364 429 aa15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 RPS9P46781 194 aaKnown RBP15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 KPNA1P52294 538 aaPredicted RBP15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 CYP27A1Q02318 531 aa15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 MAPRE1Q15691 268 aaKnown RBP15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 MDH1BQ5I0G3 518 aa15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 ZC3H14Q6PJT7 736 aaKnown RBP15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 KRBA2Q6ZNG9 492 aa15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 SLC9A9Q8IVB4 645 aa15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 CELF5Q8N6W0 485 aaKnown RBP15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 CCDC47Q96A33 483 aaKnown RBP15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 SYAP1Q96A49 352 aaPredicted RBP15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 TRMT2BQ96GJ1 504 aaKnown RBP15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 XYLT2Q9H1B5 865 aa15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 TRPC7Q9HCX4 862 aa15.39■□□□□ 0.05
HNRNPU-229ENST00000640440 DMAC2Q9NW81 257 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms