RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 H0YIZ8 118 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 FESP07332 822 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 IL6RP08887 468 aaPredicted RBP6.06□□□□□ -1.44
CCDC7-216ENST00000640058 KITP10721 976 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 NPR1P16066 1061 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 ENGP17813 658 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 CYP2C18P33260 490 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 SLC11A2P49281 568 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 PDE1AP54750 535 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 B3GNT9Q6UX72 402 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 PTF1AQ7RTS3 328 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 GLG1Q92896 1179 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 R3HDM4Q96D70 268 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 AIFM3Q96NN9 605 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 TAAR9Q96RI9 348 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 CDH19Q9H159 772 aa6.06□□□□□ -1.44
CCDC7-216ENST00000640058 NOB1Q9ULX3 412 aaKnown RBP6.06□□□□□ -1.44
CCDC7-216ENST00000640058 A0A088AWK7 358 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 H3BML4 177 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 SMIM22K7EJ46 135 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 MYO1CO00159 1063 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 QSOX1O00391 747 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 TLR5O60602 858 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 PRKCGP05129 697 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 FAM163BP0C2L3 166 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 PPIFP30405 207 aaKnown RBP6.05□□□□□ -1.44
CCDC7-216ENST00000640058 VIPR2P41587 438 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 E2F2Q14209 437 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 DEPDC1Q5TB30 811 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 SUMO4Q6EEV6 95 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 ZNF782Q6ZMW2 699 aaPredicted RBP6.05□□□□□ -1.44
CCDC7-216ENST00000640058 EPM2AIP1Q7L775 607 aaPredicted RBP6.05□□□□□ -1.44
CCDC7-216ENST00000640058 ZNF280BQ86YH2 543 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 LRRC71Q8N4P6 559 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 SLC15A4Q8N697 577 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 DNAJC5GQ8N7S2 189 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 SLC35G2Q8TBE7 412 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 MOGAT1Q96PD6 335 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 ZMAT3Q9HA38 289 aaKnown RBP6.05□□□□□ -1.44
CCDC7-216ENST00000640058 GLOD4Q9HC38 313 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 PIH1D1Q9NWS0 290 aaKnown RBP6.05□□□□□ -1.44
CCDC7-216ENST00000640058 DLL3Q9NYJ7 618 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 SHOC2Q9UQ13 582 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 MED16Q9Y2X0 877 aa6.05□□□□□ -1.44
CCDC7-216ENST00000640058 A0A1W2PPL8 197 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 DNAJC9-AS1A6NH13 148 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 TARM1B6A8C7 271 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 EEFSECP57772 596 aaKnown RBP6.04□□□□□ -1.44
CCDC7-216ENST00000640058 TFF2Q03403 129 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 KRT17Q04695 432 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 PCID2Q5JVF3 399 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 ODR4Q5SWX8 454 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 CEP85Q6P2H3 762 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 NAPRTQ6XQN6 538 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 SLC29A4Q7RTT9 530 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 FANCBQ8NB91 859 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 XAGE5Q8WWM1 108 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 SLC29A3Q9BZD2 475 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 RNF7Q9UBF6 113 aa6.04□□□□□ -1.44
CCDC7-216ENST00000640058 CCNL1Q9UK58 526 aaPredicted RBP6.04□□□□□ -1.44
CCDC7-216ENST00000640058 KAT6AQ92794 2004 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 LINC01548A6NM66 108 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 ZNF213O14771 459 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 ADORA2AP29274 412 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 EPHB1P54762 984 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 ZIK1Q3SY52 487 aaPredicted RBP6.03□□□□□ -1.44
CCDC7-216ENST00000640058 ANKRD16Q6P6B7 361 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 ZNF783Q6ZMS7 281 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 SLC15A3Q8IY34 581 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 MPP5Q8N3R9 675 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 REPS1Q96D71 796 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 MACROD1Q9BQ69 325 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 B3GNT5Q9BYG0 378 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 CXorf36Q9H7Y0 433 aa6.03□□□□□ -1.44
CCDC7-216ENST00000640058 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.03□□□□□ -1.44
CCDC7-216ENST00000640058 THRAP3Q9Y2W1 955 aaKnown RBP6.03□□□□□ -1.44
CCDC7-216ENST00000640058 A1L4Q6 167 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 TMEM233B4DJY2 109 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 NHLRC4P0CG21 123 aaPredicted RBP6.02□□□□□ -1.45
CCDC7-216ENST00000640058 SATB1Q01826 763 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 MYO1EQ12965 1108 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 GRM1Q13255 1194 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 CTBP1Q13363 440 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 LRRC41Q15345 812 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 SRSF7Q16629 238 aaKnown RBP eCLIP6.02□□□□□ -1.45
CCDC7-216ENST00000640058 AARS2Q5JTZ9 985 aaKnown RBP6.02□□□□□ -1.45
CCDC7-216ENST00000640058 LMBRD2Q68DH5 695 aaPredicted RBP6.02□□□□□ -1.45
CCDC7-216ENST00000640058 NPNTQ6UXI9 565 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 OVCH2Q7RTZ1 564 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 RAPGEF4Q8WZA2 1011 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 TBC1D5Q92609 795 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 TRIM54Q9BYV2 358 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 DUSP22Q9NRW4 184 aa6.02□□□□□ -1.45
CCDC7-216ENST00000640058 BTN3A1O00481 513 aa6.01□□□□□ -1.45
CCDC7-216ENST00000640058 PRPF3O43395 683 aaKnown RBP6.01□□□□□ -1.45
CCDC7-216ENST00000640058 CTNND1O60716 968 aaKnown RBP6.01□□□□□ -1.45
CCDC7-216ENST00000640058 RFPL1O75677 317 aa6.01□□□□□ -1.45
CCDC7-216ENST00000640058 JTBO76095 146 aa6.01□□□□□ -1.45
CCDC7-216ENST00000640058 VNN1O95497 513 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms