RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 ATXN2LQ8WWM7 1075 aaKnown RBP5.93□□□□□ -1.46
SCARB2-218ENST00000639715 MTMR8Q96EF0 704 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 NSL1Q96IY1 281 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 TRIM51Q9BSJ1 452 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 THTPAQ9BU02 230 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 ZNF341Q9BYN7 854 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 FOXP3Q9BZS1 431 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 PABPC3Q9H361 631 aaKnown RBP5.93□□□□□ -1.46
SCARB2-218ENST00000639715 SCN11AQ9UI33 1791 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 GAKO14976 1311 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 DENND3A2RUS2 1198 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 B2RBV5 119 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 ATP9BO43861 1147 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 PEX14O75381 377 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 ZBED1O96006 694 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 KRT8P05787 483 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 PLS3P13797 630 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 GNAZP19086 355 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 CPA2P48052 419 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 TRPC1P48995 793 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 IST1P53990 364 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 MIIPQ5JXC2 388 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 EMC10Q5UCC4 262 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 TUBA3EQ6PEY2 450 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 TTC39CQ8N584 583 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 TTC13Q8NBP0 860 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 CELF4Q9BZC1 486 aaKnown RBP5.93□□□□□ -1.46
SCARB2-218ENST00000639715 ROPN1BQ9BZX4 212 aaPredicted RBP5.93□□□□□ -1.46
SCARB2-218ENST00000639715 LRMDAQ9H2I8 198 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 ROPN1Q9HAT0 212 aaPredicted RBP5.93□□□□□ -1.46
SCARB2-218ENST00000639715 FAIMQ9NVQ4 179 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 GIN1Q9NXP7 522 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 ANKFY1Q9P2R3 1169 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 POLLQ9UGP5 575 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 APPL1Q9UKG1 709 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 ALG6Q9Y672 507 aa5.93□□□□□ -1.46
SCARB2-218ENST00000639715 EXOC1LA0A1B0GW35 172 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 RCCD1A6NED2 376 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 POC1B-GALNT4F8VUJ3 575 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 RAD17O75943 681 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 OR6B1O95007 311 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 KRT1P04264 644 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 EIF2S1P05198 315 aaKnown RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 CALB1P05937 261 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 VEGFAP15692 232 aaPredicted RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 ITIH2P19823 946 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 HOXA10P31260 410 aaPredicted RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 CHN2P52757 468 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 TMED2Q15363 201 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 KYNUQ16719 465 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 C15orf59Q2T9L4 293 aaPredicted RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 CYP4F22Q6NT55 531 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 CENPUQ71F23 418 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 HEATR4Q86WZ0 1026 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 IFNLR1Q8IU57 520 aaPredicted RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 RHOT1Q8IXI2 618 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 NUP93Q8N1F7 819 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 TTLL6Q8N841 843 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 TMEM35BQ8NCS4 154 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 EPS8L3Q8TE67 593 aaKnown RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 HPS1Q92902 700 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 LRGUKQ96M69 825 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 HNRNPABQ99729 332 aaKnown RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 TRIM55Q9BYV6 548 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 KLHL4Q9C0H6 718 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 C12orf4Q9NQ89 552 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 AGPAT3Q9NRZ7 376 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 HSPBP1Q9NZL4 362 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 ZNF229Q9UJW7 825 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 SGK1O00141 431 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 AP3M2P53677 418 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 EGFLAMQ63HQ2 1017 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 PLEKHA7Q6IQ23 1121 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 LRRC55Q6ZSA7 311 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 TMC3Q7Z5M5 1100 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 PCGF5Q86SE9 256 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 PASD1Q8IV76 773 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 DCLK2Q8N568 766 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 NSUN6Q8TEA1 469 aaKnown RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 FAM151AQ8WW52 585 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 LPAR1Q92633 364 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 SLC35B4Q969S0 331 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 CCDC124Q96CT7 223 aaKnown RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 SNF8Q96H20 258 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 CNBD2Q96M20 576 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 ZNF317Q96PQ6 595 aaPredicted RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 TPK1Q9H3S4 243 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 MARCH7Q9H992 704 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 NPHS2Q9NP85 383 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 TRPV5Q9NQA5 729 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 CYLDQ9NQC7 956 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 TTC7AQ9ULT0 858 aaPredicted RBP5.92□□□□□ -1.46
SCARB2-218ENST00000639715 PCDHA10Q9Y5I2 948 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 ROBO3Q96MS0 1386 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 KCPQ6ZWJ8 1503 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 ARFGEF2Q9Y6D5 1785 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 MYPNQ86TC9 1320 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 SMIM22K7EJ46 135 aa5.92□□□□□ -1.46
SCARB2-218ENST00000639715 RNF225M0QZC1 329 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms